Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.38■□□□□ 0.37
SYN1P17600 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYN1P17600 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.38■□□□□ 0.37
SYN1P17600 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYN1P17600 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYN1P17600 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SYN1P17600 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYN1P17600 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYN1P17600 AC018470.1-201ENST00000624790 3129 ntBASIC17.38■□□□□ 0.37
SYN1P17600 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SYN1P17600 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.38■□□□□ 0.37
SYN1P17600 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SYN1P17600 AC015818.8-201ENST00000587907 1519 ntBASIC17.37■□□□□ 0.37
SYN1P17600 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.37■□□□□ 0.37
SYN1P17600 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SYN1P17600 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SYN1P17600 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.37■□□□□ 0.37
SYN1P17600 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.37■□□□□ 0.37
SYN1P17600 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.37■□□□□ 0.37
SYN1P17600 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.37■□□□□ 0.37
SYN1P17600 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.37■□□□□ 0.37
SYN1P17600 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.37■□□□□ 0.37
SYN1P17600 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.37■□□□□ 0.37
SYN1P17600 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
SYN1P17600 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.37■□□□□ 0.37
SYN1P17600 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SYN1P17600 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.37■□□□□ 0.37
SYN1P17600 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYN1P17600 AC005622.1-201ENST00000636801 1703 ntBASIC17.36■□□□□ 0.37
SYN1P17600 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYN1P17600 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SYN1P17600 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.36■□□□□ 0.37
SYN1P17600 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SYN1P17600 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYN1P17600 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYN1P17600 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYN1P17600 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYN1P17600 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SYN1P17600 AL133466.1-201ENST00000447582 150 ntBASIC17.36■□□□□ 0.37
SYN1P17600 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYN1P17600 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.36■□□□□ 0.37
SYN1P17600 AL590640.2-201ENST00000457038 527 ntBASIC17.36■□□□□ 0.37
SYN1P17600 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.36■□□□□ 0.37
SYN1P17600 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.36■□□□□ 0.37
SYN1P17600 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.36■□□□□ 0.37
SYN1P17600 NOC2LP2-201ENST00000407594 1944 ntBASIC17.36■□□□□ 0.37
SYN1P17600 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYN1P17600 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.36■□□□□ 0.37
SYN1P17600 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.36■□□□□ 0.37
SYN1P17600 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYN1P17600 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYN1P17600 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYN1P17600 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.36■□□□□ 0.37
SYN1P17600 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
SYN1P17600 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYN1P17600 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYN1P17600 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYN1P17600 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYN1P17600 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYN1P17600 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
SYN1P17600 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYN1P17600 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.35■□□□□ 0.37
SYN1P17600 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYN1P17600 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYN1P17600 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.35■□□□□ 0.37
SYN1P17600 TOMM22P5-201ENST00000416399 439 ntBASIC17.35■□□□□ 0.37
SYN1P17600 AL355334.1-201ENST00000417713 215 ntBASIC17.35■□□□□ 0.37
SYN1P17600 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYN1P17600 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.35■□□□□ 0.37
SYN1P17600 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYN1P17600 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC17.35■□□□□ 0.37
SYN1P17600 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYN1P17600 MIR4750-201ENST00000584564 56 ntBASIC17.35■□□□□ 0.37
SYN1P17600 AP001505.2-201ENST00000616815 443 ntBASIC17.35■□□□□ 0.37
SYN1P17600 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SYN1P17600 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SYN1P17600 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYN1P17600 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms