Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
FAM228BP0C875 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
FAM228BP0C875 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FAM228BP0C875 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.23■□□□□ 0.35
FAM228BP0C875 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
FAM228BP0C875 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.23■□□□□ 0.35
FAM228BP0C875 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FAM228BP0C875 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FAM228BP0C875 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.23■□□□□ 0.35
FAM228BP0C875 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.23■□□□□ 0.35
FAM228BP0C875 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.23■□□□□ 0.35
FAM228BP0C875 AL138918.1-201ENST00000568306 659 ntBASIC17.23■□□□□ 0.35
FAM228BP0C875 AP002472.1-201ENST00000577490 586 ntBASIC17.23■□□□□ 0.35
FAM228BP0C875 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.23■□□□□ 0.35
FAM228BP0C875 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.23■□□□□ 0.35
FAM228BP0C875 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FAM228BP0C875 AC023157.3-201ENST00000619086 2088 ntBASIC17.23■□□□□ 0.35
FAM228BP0C875 TMBIM7P-203ENST00000641617 1718 ntBASIC17.23■□□□□ 0.35
FAM228BP0C875 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FAM228BP0C875 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FAM228BP0C875 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.23■□□□□ 0.35
FAM228BP0C875 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FAM228BP0C875 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FAM228BP0C875 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
FAM228BP0C875 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FAM228BP0C875 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FAM228BP0C875 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FAM228BP0C875 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.22■□□□□ 0.35
FAM228BP0C875 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
FAM228BP0C875 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FAM228BP0C875 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FAM228BP0C875 AC105250.1-201ENST00000509378 2057 ntBASIC17.22■□□□□ 0.35
FAM228BP0C875 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
FAM228BP0C875 AC006486.2-201ENST00000624246 2199 ntBASIC17.22■□□□□ 0.35
FAM228BP0C875 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.22■□□□□ 0.35
FAM228BP0C875 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FAM228BP0C875 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FAM228BP0C875 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FAM228BP0C875 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
FAM228BP0C875 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FAM228BP0C875 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FAM228BP0C875 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.22■□□□□ 0.35
FAM228BP0C875 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FAM228BP0C875 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.22■□□□□ 0.35
FAM228BP0C875 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.22■□□□□ 0.35
FAM228BP0C875 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FAM228BP0C875 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FAM228BP0C875 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.22■□□□□ 0.35
FAM228BP0C875 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.22■□□□□ 0.35
FAM228BP0C875 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.22■□□□□ 0.35
FAM228BP0C875 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FAM228BP0C875 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FAM228BP0C875 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.22■□□□□ 0.35
FAM228BP0C875 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.22■□□□□ 0.35
FAM228BP0C875 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.22■□□□□ 0.35
FAM228BP0C875 AC068137.2-201ENST00000605408 478 ntBASIC17.22■□□□□ 0.35
FAM228BP0C875 AL513190.1-201ENST00000621254 727 ntBASIC17.22■□□□□ 0.35
FAM228BP0C875 AL161645.1-201ENST00000622716 1255 ntBASIC17.22■□□□□ 0.35
FAM228BP0C875 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.22■□□□□ 0.35
FAM228BP0C875 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.22■□□□□ 0.35
FAM228BP0C875 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
FAM228BP0C875 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FAM228BP0C875 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.22■□□□□ 0.35
FAM228BP0C875 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FAM228BP0C875 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.22■□□□□ 0.35
FAM228BP0C875 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.22■□□□□ 0.35
FAM228BP0C875 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.21■□□□□ 0.35
FAM228BP0C875 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
FAM228BP0C875 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FAM228BP0C875 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
FAM228BP0C875 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FAM228BP0C875 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
FAM228BP0C875 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.21■□□□□ 0.35
FAM228BP0C875 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.21■□□□□ 0.35
FAM228BP0C875 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.21■□□□□ 0.35
FAM228BP0C875 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FAM228BP0C875 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FAM228BP0C875 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FAM228BP0C875 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FAM228BP0C875 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FAM228BP0C875 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
FAM228BP0C875 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
FAM228BP0C875 AC074386.1-202ENST00000463561 864 ntBASIC17.21■□□□□ 0.35
FAM228BP0C875 RPL13AP23-201ENST00000480739 586 ntBASIC17.21■□□□□ 0.35
FAM228BP0C875 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.21■□□□□ 0.35
FAM228BP0C875 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.21■□□□□ 0.35
FAM228BP0C875 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.21■□□□□ 0.35
FAM228BP0C875 PDPK2P-202ENST00000562415 1191 ntBASIC17.21■□□□□ 0.35
FAM228BP0C875 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.21■□□□□ 0.35
FAM228BP0C875 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.21■□□□□ 0.35
FAM228BP0C875 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.21■□□□□ 0.35
FAM228BP0C875 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.21■□□□□ 0.35
FAM228BP0C875 AC099522.2-201ENST00000607001 744 ntBASIC17.21■□□□□ 0.35
FAM228BP0C875 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
FAM228BP0C875 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
FAM228BP0C875 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
FAM228BP0C875 AC090616.6-203ENST00000579186 1945 ntBASIC17.21■□□□□ 0.35
FAM228BP0C875 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FAM228BP0C875 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FAM228BP0C875 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms