Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.98■□□□□ 0.15
CAPN1P07384 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.98■□□□□ 0.15
CAPN1P07384 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.98■□□□□ 0.15
CAPN1P07384 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CAPN1P07384 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN1P07384 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN1P07384 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN1P07384 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN1P07384 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN1P07384 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN1P07384 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CAPN1P07384 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN1P07384 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CAPN1P07384 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPN1P07384 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN1P07384 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPN1P07384 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CAPN1P07384 AC068587.6-202ENST00000641839 5619 ntBASIC15.97■□□□□ 0.15
CAPN1P07384 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN1P07384 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN1P07384 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN1P07384 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN1P07384 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN1P07384 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN1P07384 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.97■□□□□ 0.15
CAPN1P07384 AC002056.1-201ENST00000395613 760 ntBASIC15.97■□□□□ 0.15
CAPN1P07384 HMGA1P7-201ENST00000406908 502 ntBASIC15.97■□□□□ 0.15
CAPN1P07384 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN1P07384 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN1P07384 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN1P07384 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.97■□□□□ 0.15
CAPN1P07384 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.97■□□□□ 0.15
CAPN1P07384 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CAPN1P07384 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPN1P07384 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPN1P07384 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CAPN1P07384 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
CAPN1P07384 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPN1P07384 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPN1P07384 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN1P07384 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN1P07384 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CAPN1P07384 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN1P07384 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN1P07384 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.97■□□□□ 0.15
CAPN1P07384 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPN1P07384 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN1P07384 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.97■□□□□ 0.15
CAPN1P07384 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CAPN1P07384 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.97■□□□□ 0.15
CAPN1P07384 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CAPN1P07384 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.96■□□□□ 0.15
CAPN1P07384 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CAPN1P07384 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.96■□□□□ 0.15
CAPN1P07384 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CAPN1P07384 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CAPN1P07384 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.96■□□□□ 0.15
CAPN1P07384 RNU1-129P-201ENST00000384064 167 ntBASIC15.96■□□□□ 0.15
CAPN1P07384 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.96■□□□□ 0.15
CAPN1P07384 AL645939.2-201ENST00000427340 991 ntBASIC15.96■□□□□ 0.15
CAPN1P07384 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.96■□□□□ 0.15
CAPN1P07384 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CAPN1P07384 CYMP-203ENST00000474680 1263 ntBASIC15.96■□□□□ 0.15
CAPN1P07384 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.96■□□□□ 0.15
CAPN1P07384 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.96■□□□□ 0.15
CAPN1P07384 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.96■□□□□ 0.15
CAPN1P07384 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.96■□□□□ 0.15
CAPN1P07384 U1.21-201ENST00000580816 167 ntBASIC15.96■□□□□ 0.15
CAPN1P07384 AC004835.2-201ENST00000603762 682 ntBASIC15.96■□□□□ 0.15
CAPN1P07384 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.96■□□□□ 0.15
CAPN1P07384 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
CAPN1P07384 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.96■□□□□ 0.15
CAPN1P07384 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CAPN1P07384 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.96■□□□□ 0.15
CAPN1P07384 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CAPN1P07384 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 AC005622.1-201ENST00000636801 1703 ntBASIC15.96■□□□□ 0.15
CAPN1P07384 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN1P07384 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.96■□□□□ 0.15
CAPN1P07384 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CAPN1P07384 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CAPN1P07384 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CAPN1P07384 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CAPN1P07384 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms