Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL5A2P05997 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC20.84■□□□□ 0.93
COL5A2P05997 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC20.84■□□□□ 0.93
COL5A2P05997 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC20.84■□□□□ 0.93
COL5A2P05997 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL5A2P05997 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL5A2P05997 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
COL5A2P05997 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL5A2P05997 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL5A2P05997 AL645608.8-201ENST00000606034 2086 ntBASIC20.84■□□□□ 0.93
COL5A2P05997 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL5A2P05997 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC20.84■□□□□ 0.93
COL5A2P05997 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.84■□□□□ 0.93
COL5A2P05997 FOS-202ENST00000535987 1402 ntTSL 2 BASIC20.84■□□□□ 0.93
COL5A2P05997 AC015818.8-201ENST00000587907 1519 ntBASIC20.84■□□□□ 0.93
COL5A2P05997 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.84■□□□□ 0.93
COL5A2P05997 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL5A2P05997 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC20.83■□□□□ 0.93
COL5A2P05997 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL5A2P05997 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
COL5A2P05997 AL133373.2-201ENST00000623187 2828 ntBASIC20.83■□□□□ 0.93
COL5A2P05997 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC20.83■□□□□ 0.93
COL5A2P05997 CSH2-202ENST00000345366 598 ntTSL 5 BASIC20.83■□□□□ 0.93
COL5A2P05997 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
COL5A2P05997 RNU1-114P-201ENST00000365297 166 ntBASIC20.83■□□□□ 0.93
COL5A2P05997 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC20.83■□□□□ 0.93
COL5A2P05997 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC20.83■□□□□ 0.93
COL5A2P05997 EIF4HP1-201ENST00000453115 687 ntBASIC20.83■□□□□ 0.93
COL5A2P05997 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC20.83■□□□□ 0.93
COL5A2P05997 AC104982.3-201ENST00000581995 514 ntBASIC20.83■□□□□ 0.93
COL5A2P05997 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC20.83■□□□□ 0.93
COL5A2P05997 ECM1P1-201ENST00000604092 1279 ntBASIC20.83■□□□□ 0.93
COL5A2P05997 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL5A2P05997 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.83■□□□□ 0.93
COL5A2P05997 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL5A2P05997 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL5A2P05997 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.83■□□□□ 0.93
COL5A2P05997 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL5A2P05997 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL5A2P05997 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
COL5A2P05997 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL5A2P05997 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL5A2P05997 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.83■□□□□ 0.92
COL5A2P05997 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL5A2P05997 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL5A2P05997 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL5A2P05997 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
COL5A2P05997 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
COL5A2P05997 TSACC-208ENST00000481479 741 ntTSL 2 BASIC20.82■□□□□ 0.92
COL5A2P05997 RNA5SP486-201ENST00000515961 83 ntBASIC20.82■□□□□ 0.92
COL5A2P05997 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL5A2P05997 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC20.82■□□□□ 0.92
COL5A2P05997 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
COL5A2P05997 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL5A2P05997 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL5A2P05997 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL5A2P05997 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL5A2P05997 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL5A2P05997 TK1-203ENST00000588734 1681 ntTSL 2 BASIC20.82■□□□□ 0.92
COL5A2P05997 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL5A2P05997 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL5A2P05997 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL5A2P05997 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC20.82■□□□□ 0.92
COL5A2P05997 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC20.82■□□□□ 0.92
COL5A2P05997 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL5A2P05997 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC20.81■□□□□ 0.92
COL5A2P05997 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC20.81■□□□□ 0.92
COL5A2P05997 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC20.81■□□□□ 0.92
COL5A2P05997 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COL5A2P05997 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL5A2P05997 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC20.81■□□□□ 0.92
COL5A2P05997 AMT-233ENST00000636522 1620 ntTSL 2 BASIC20.81■□□□□ 0.92
COL5A2P05997 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL5A2P05997 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
COL5A2P05997 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
COL5A2P05997 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL5A2P05997 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.81■□□□□ 0.92
COL5A2P05997 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL5A2P05997 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL5A2P05997 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL5A2P05997 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
COL5A2P05997 KRT8P19-201ENST00000551916 1455 ntBASIC20.81■□□□□ 0.92
COL5A2P05997 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.81■□□□□ 0.92
COL5A2P05997 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL5A2P05997 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL5A2P05997 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC20.81■□□□□ 0.92
COL5A2P05997 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COL5A2P05997 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COL5A2P05997 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC20.81■□□□□ 0.92
COL5A2P05997 UPF3AP2-201ENST00000457924 1132 ntBASIC20.81■□□□□ 0.92
COL5A2P05997 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC20.81■□□□□ 0.92
COL5A2P05997 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC20.81■□□□□ 0.92
COL5A2P05997 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC20.81■□□□□ 0.92
COL5A2P05997 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL5A2P05997 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC20.81■□□□□ 0.92
COL5A2P05997 MIR3619-201ENST00000579667 83 ntBASIC20.81■□□□□ 0.92
COL5A2P05997 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC20.81■□□□□ 0.92
COL5A2P05997 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC20.81■□□□□ 0.92
COL5A2P05997 AC138627.1-207ENST00000641560 1006 ntBASIC20.81■□□□□ 0.92
COL5A2P05997 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms