Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MIR4492-201ENST00000581627 80 ntBASIC14.61□□□□□ -0.07
HLA-DPB1P04440 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 AC010654.1-201ENST00000615722 808 ntBASIC14.61□□□□□ -0.07
HLA-DPB1P04440 AC008735.5-201ENST00000623544 497 ntBASIC14.61□□□□□ -0.07
HLA-DPB1P04440 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 AC006486.2-201ENST00000624246 2199 ntBASIC14.61□□□□□ -0.07
HLA-DPB1P04440 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 TMBIM7P-203ENST00000641617 1718 ntBASIC14.61□□□□□ -0.07
HLA-DPB1P04440 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 RPS2P28-201ENST00000314255 741 ntBASIC14.6□□□□□ -0.07
HLA-DPB1P04440 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 AL031284.1-201ENST00000419297 478 ntBASIC14.6□□□□□ -0.07
HLA-DPB1P04440 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 MPDU1-223ENST00000582151 728 ntBASIC14.6□□□□□ -0.07
HLA-DPB1P04440 SLC25A6P4-201ENST00000586535 553 ntBASIC14.6□□□□□ -0.07
HLA-DPB1P04440 FAM215A-202ENST00000632077 792 ntBASIC14.6□□□□□ -0.07
HLA-DPB1P04440 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 AP002414.3-201ENST00000589352 1468 ntBASIC14.6□□□□□ -0.07
HLA-DPB1P04440 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DPB1P04440 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 PI4KAP1-204ENST00000612579 1703 ntBASIC14.59□□□□□ -0.07
HLA-DPB1P04440 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 KRT18P27-201ENST00000427733 1299 ntBASIC14.59□□□□□ -0.07
HLA-DPB1P04440 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 AC092910.1-201ENST00000482027 1129 ntBASIC14.59□□□□□ -0.07
HLA-DPB1P04440 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 AC105339.3-201ENST00000560043 636 ntBASIC14.59□□□□□ -0.07
HLA-DPB1P04440 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 MIR1199-201ENST00000621445 119 ntBASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms