Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.42■□□□□ 0.38
CHRNA1P02708 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.42■□□□□ 0.38
CHRNA1P02708 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.42■□□□□ 0.38
CHRNA1P02708 KRT223P-202ENST00000449164 1292 ntBASIC17.42■□□□□ 0.38
CHRNA1P02708 PHKG1P2-201ENST00000457537 863 ntBASIC17.42■□□□□ 0.38
CHRNA1P02708 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHRNA1P02708 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.42■□□□□ 0.38
CHRNA1P02708 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.42■□□□□ 0.38
CHRNA1P02708 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.42■□□□□ 0.38
CHRNA1P02708 CU634019.7-201ENST00000624153 1185 ntBASIC17.42■□□□□ 0.38
CHRNA1P02708 FP236241.2-201ENST00000624906 1185 ntBASIC17.42■□□□□ 0.38
CHRNA1P02708 AL033527.4-201ENST00000641026 673 ntBASIC17.42■□□□□ 0.38
CHRNA1P02708 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CHRNA1P02708 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
CHRNA1P02708 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHRNA1P02708 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA1P02708 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNA1P02708 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNA1P02708 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.41■□□□□ 0.38
CHRNA1P02708 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA1P02708 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA1P02708 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNA1P02708 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CHRNA1P02708 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.41■□□□□ 0.38
CHRNA1P02708 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA1P02708 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.41■□□□□ 0.38
CHRNA1P02708 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNA1P02708 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.41■□□□□ 0.38
CHRNA1P02708 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNA1P02708 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CHRNA1P02708 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.41■□□□□ 0.38
CHRNA1P02708 AC233724.13-201ENST00000598383 410 ntBASIC17.41■□□□□ 0.38
CHRNA1P02708 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.41■□□□□ 0.38
CHRNA1P02708 AC133552.6-201ENST00000613406 534 ntBASIC17.41■□□□□ 0.38
CHRNA1P02708 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA1P02708 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
CHRNA1P02708 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA1P02708 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA1P02708 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA1P02708 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA1P02708 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNA1P02708 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHRNA1P02708 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHRNA1P02708 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CHRNA1P02708 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.41■□□□□ 0.38
CHRNA1P02708 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA1P02708 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA1P02708 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA1P02708 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHRNA1P02708 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNA1P02708 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.4■□□□□ 0.38
CHRNA1P02708 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHRNA1P02708 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.4■□□□□ 0.38
CHRNA1P02708 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CHRNA1P02708 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.4■□□□□ 0.38
CHRNA1P02708 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.4■□□□□ 0.38
CHRNA1P02708 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHRNA1P02708 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.4■□□□□ 0.38
CHRNA1P02708 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
CHRNA1P02708 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.4■□□□□ 0.38
CHRNA1P02708 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CHRNA1P02708 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 ACTG1P3-201ENST00000431775 1114 ntBASIC17.4■□□□□ 0.38
CHRNA1P02708 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.4■□□□□ 0.38
CHRNA1P02708 AL162726.2-201ENST00000438986 1017 ntBASIC17.4■□□□□ 0.38
CHRNA1P02708 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.4■□□□□ 0.38
CHRNA1P02708 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.4■□□□□ 0.38
CHRNA1P02708 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.4■□□□□ 0.38
CHRNA1P02708 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.4■□□□□ 0.38
CHRNA1P02708 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.4■□□□□ 0.38
CHRNA1P02708 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.4■□□□□ 0.38
CHRNA1P02708 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CHRNA1P02708 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.4■□□□□ 0.38
CHRNA1P02708 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms