Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.41□□□□□ -0.1
CNOT4O95628 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
CNOT4O95628 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CNOT4O95628 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CNOT4O95628 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.41□□□□□ -0.1
CNOT4O95628 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CNOT4O95628 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CNOT4O95628 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.41□□□□□ -0.1
CNOT4O95628 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.41□□□□□ -0.1
CNOT4O95628 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 TUBB3P1-201ENST00000405796 1332 ntBASIC14.41□□□□□ -0.1
CNOT4O95628 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.4□□□□□ -0.1
CNOT4O95628 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.4□□□□□ -0.1
CNOT4O95628 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CNOT4O95628 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CNOT4O95628 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.4□□□□□ -0.1
CNOT4O95628 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.4□□□□□ -0.1
CNOT4O95628 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CNOT4O95628 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.4□□□□□ -0.1
CNOT4O95628 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CNOT4O95628 AC005034.1-201ENST00000426657 489 ntBASIC14.4□□□□□ -0.1
CNOT4O95628 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.4□□□□□ -0.1
CNOT4O95628 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.4□□□□□ -0.1
CNOT4O95628 KLF2P3-201ENST00000451977 1087 ntBASIC14.4□□□□□ -0.1
CNOT4O95628 AL390955.2-201ENST00000603032 514 ntBASIC14.4□□□□□ -0.1
CNOT4O95628 AL035252.4-201ENST00000624174 288 ntBASIC14.4□□□□□ -0.1
CNOT4O95628 AF228730.6-201ENST00000641497 218 ntBASIC14.4□□□□□ -0.1
CNOT4O95628 AC084121.3-201ENST00000641716 218 ntBASIC14.4□□□□□ -0.1
CNOT4O95628 AC105233.6-201ENST00000642093 218 ntBASIC14.4□□□□□ -0.1
CNOT4O95628 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CNOT4O95628 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CNOT4O95628 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CNOT4O95628 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.4□□□□□ -0.1
CNOT4O95628 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.4□□□□□ -0.1
CNOT4O95628 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.4□□□□□ -0.1
CNOT4O95628 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.4□□□□□ -0.1
CNOT4O95628 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CNOT4O95628 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
CNOT4O95628 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.4□□□□□ -0.1
CNOT4O95628 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
CNOT4O95628 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CNOT4O95628 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CNOT4O95628 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
CNOT4O95628 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.39□□□□□ -0.11
CNOT4O95628 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.39□□□□□ -0.11
CNOT4O95628 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CNOT4O95628 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CNOT4O95628 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CNOT4O95628 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CNOT4O95628 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms