Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDRT1O95170 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDRT1O95170 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 CICP4-201ENST00000447359 2812 ntBASIC14.49□□□□□ -0.09
CDRT1O95170 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.49□□□□□ -0.09
CDRT1O95170 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.49□□□□□ -0.09
CDRT1O95170 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
CDRT1O95170 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.49□□□□□ -0.09
CDRT1O95170 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.49□□□□□ -0.09
CDRT1O95170 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CDRT1O95170 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.49□□□□□ -0.09
CDRT1O95170 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 POM121L3P-201ENST00000419331 1163 ntBASIC14.49□□□□□ -0.09
CDRT1O95170 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.49□□□□□ -0.09
CDRT1O95170 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.49□□□□□ -0.09
CDRT1O95170 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.49□□□□□ -0.09
CDRT1O95170 MIR4492-201ENST00000581627 80 ntBASIC14.49□□□□□ -0.09
CDRT1O95170 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.49□□□□□ -0.09
CDRT1O95170 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.49□□□□□ -0.09
CDRT1O95170 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
CDRT1O95170 AL590326.2-201ENST00000625139 305 ntBASIC14.49□□□□□ -0.09
CDRT1O95170 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CDRT1O95170 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.49□□□□□ -0.09
CDRT1O95170 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CDRT1O95170 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.49□□□□□ -0.09
CDRT1O95170 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDRT1O95170 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.49□□□□□ -0.09
CDRT1O95170 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDRT1O95170 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT1O95170 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.49□□□□□ -0.09
CDRT1O95170 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDRT1O95170 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CDRT1O95170 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.48□□□□□ -0.09
CDRT1O95170 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CDRT1O95170 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDRT1O95170 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.48□□□□□ -0.09
CDRT1O95170 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
CDRT1O95170 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.48□□□□□ -0.09
CDRT1O95170 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.48□□□□□ -0.09
CDRT1O95170 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 NUS1P2-201ENST00000417358 873 ntBASIC14.48□□□□□ -0.09
CDRT1O95170 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.48□□□□□ -0.09
CDRT1O95170 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDRT1O95170 ABCD1P5-201ENST00000445663 754 ntBASIC14.48□□□□□ -0.09
CDRT1O95170 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.48□□□□□ -0.09
CDRT1O95170 MPDU1-223ENST00000582151 728 ntBASIC14.48□□□□□ -0.09
CDRT1O95170 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.48□□□□□ -0.09
CDRT1O95170 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.48□□□□□ -0.09
CDRT1O95170 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.48□□□□□ -0.09
CDRT1O95170 AC099336.1-202ENST00000602961 463 ntBASIC14.48□□□□□ -0.09
CDRT1O95170 PGM5P2-202ENST00000637225 1043 ntBASIC14.48□□□□□ -0.09
CDRT1O95170 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.48□□□□□ -0.09
CDRT1O95170 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDRT1O95170 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
CDRT1O95170 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 SIGLEC16-201ENST00000599858 1437 ntBASIC14.48□□□□□ -0.09
CDRT1O95170 CICP23-201ENST00000605013 2741 ntBASIC14.48□□□□□ -0.09
CDRT1O95170 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDRT1O95170 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT1O95170 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.48□□□□□ -0.09
CDRT1O95170 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms