Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.88□□□□□ -0.03
NKX2-2O95096 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NKX2-2O95096 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-2O95096 SNHG9-202ENST00000564014 471 ntBASIC14.88□□□□□ -0.03
NKX2-2O95096 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.88□□□□□ -0.03
NKX2-2O95096 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.88□□□□□ -0.03
NKX2-2O95096 AC023511.2-201ENST00000618803 211 ntBASIC14.88□□□□□ -0.03
NKX2-2O95096 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-2O95096 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NKX2-2O95096 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-2O95096 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-2O95096 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.88□□□□□ -0.03
NKX2-2O95096 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
NKX2-2O95096 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-2O95096 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
NKX2-2O95096 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.88□□□□□ -0.03
NKX2-2O95096 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-2O95096 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.88□□□□□ -0.03
NKX2-2O95096 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX2-2O95096 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX2-2O95096 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX2-2O95096 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX2-2O95096 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
NKX2-2O95096 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-2O95096 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-2O95096 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX2-2O95096 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.87□□□□□ -0.03
NKX2-2O95096 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX2-2O95096 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX2-2O95096 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-2O95096 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-2O95096 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-2O95096 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NKX2-2O95096 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-2O95096 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX2-2O95096 MIR1233-2-201ENST00000408138 82 ntBASIC14.87□□□□□ -0.03
NKX2-2O95096 MIR1233-1-201ENST00000408722 82 ntBASIC14.87□□□□□ -0.03
NKX2-2O95096 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.87□□□□□ -0.03
NKX2-2O95096 EEF1DP4-201ENST00000446006 880 ntBASIC14.87□□□□□ -0.03
NKX2-2O95096 DNAJB3-202ENST00000449667 1266 ntBASIC14.87□□□□□ -0.03
NKX2-2O95096 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.87□□□□□ -0.03
NKX2-2O95096 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NKX2-2O95096 BANF1P1-201ENST00000553684 263 ntBASIC14.87□□□□□ -0.03
NKX2-2O95096 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-2O95096 AC105021.1-202ENST00000570572 669 ntBASIC14.87□□□□□ -0.03
NKX2-2O95096 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.87□□□□□ -0.03
NKX2-2O95096 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.87□□□□□ -0.03
NKX2-2O95096 AC027612.4-201ENST00000605371 583 ntBASIC14.87□□□□□ -0.03
NKX2-2O95096 AP001059.3-201ENST00000619053 235 ntBASIC14.87□□□□□ -0.03
NKX2-2O95096 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX2-2O95096 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.87□□□□□ -0.03
NKX2-2O95096 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NKX2-2O95096 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
NKX2-2O95096 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NKX2-2O95096 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-2O95096 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX2-2O95096 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
NKX2-2O95096 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-2O95096 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-2O95096 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-2O95096 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.87□□□□□ -0.03
NKX2-2O95096 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-2O95096 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-2O95096 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NKX2-2O95096 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-2O95096 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.86□□□□□ -0.03
NKX2-2O95096 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NKX2-2O95096 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NKX2-2O95096 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NKX2-2O95096 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
NKX2-2O95096 AL512356.2-201ENST00000546955 174 ntBASIC14.86□□□□□ -0.03
NKX2-2O95096 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.86□□□□□ -0.03
NKX2-2O95096 AL596442.2-201ENST00000610240 980 ntBASIC14.86□□□□□ -0.03
NKX2-2O95096 AC007967.4-201ENST00000614700 386 ntBASIC14.86□□□□□ -0.03
NKX2-2O95096 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.86□□□□□ -0.03
NKX2-2O95096 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.86□□□□□ -0.03
NKX2-2O95096 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.86□□□□□ -0.03
NKX2-2O95096 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-2O95096 AC105917.1-201ENST00000506637 2539 ntBASIC14.86□□□□□ -0.03
NKX2-2O95096 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.86□□□□□ -0.03
NKX2-2O95096 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms