Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PFDN6O15212 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN6O15212 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN6O15212 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.26■□□□□ 0.19
PFDN6O15212 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.26■□□□□ 0.19
PFDN6O15212 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN6O15212 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.26■□□□□ 0.19
PFDN6O15212 AC245100.5-201ENST00000452108 331 ntBASIC16.26■□□□□ 0.19
PFDN6O15212 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.26■□□□□ 0.19
PFDN6O15212 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.26■□□□□ 0.19
PFDN6O15212 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN6O15212 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN6O15212 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.26■□□□□ 0.19
PFDN6O15212 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.26■□□□□ 0.19
PFDN6O15212 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN6O15212 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN6O15212 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN6O15212 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN6O15212 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
PFDN6O15212 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN6O15212 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN6O15212 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
PFDN6O15212 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN6O15212 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN6O15212 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PFDN6O15212 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
PFDN6O15212 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PFDN6O15212 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PFDN6O15212 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PFDN6O15212 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.25■□□□□ 0.19
PFDN6O15212 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PFDN6O15212 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PFDN6O15212 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PFDN6O15212 RN7SL589P-201ENST00000481268 310 ntBASIC16.25■□□□□ 0.19
PFDN6O15212 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.25■□□□□ 0.19
PFDN6O15212 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.25■□□□□ 0.19
PFDN6O15212 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.25■□□□□ 0.19
PFDN6O15212 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PFDN6O15212 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.25■□□□□ 0.19
PFDN6O15212 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.25■□□□□ 0.19
PFDN6O15212 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.25■□□□□ 0.19
PFDN6O15212 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PFDN6O15212 PCDHA3-202ENST00000532566 4594 ntBASIC16.25■□□□□ 0.19
PFDN6O15212 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.25■□□□□ 0.19
PFDN6O15212 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.25■□□□□ 0.19
PFDN6O15212 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.25■□□□□ 0.19
PFDN6O15212 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.25■□□□□ 0.19
PFDN6O15212 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN6O15212 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PFDN6O15212 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.24■□□□□ 0.19
PFDN6O15212 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN6O15212 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.24■□□□□ 0.19
PFDN6O15212 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN6O15212 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN6O15212 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PFDN6O15212 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN6O15212 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN6O15212 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PFDN6O15212 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN6O15212 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.24■□□□□ 0.19
PFDN6O15212 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN6O15212 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN6O15212 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.24■□□□□ 0.19
PFDN6O15212 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.24■□□□□ 0.19
PFDN6O15212 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN6O15212 MIR940-201ENST00000401276 94 ntBASIC16.24■□□□□ 0.19
PFDN6O15212 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN6O15212 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.24■□□□□ 0.19
PFDN6O15212 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.24■□□□□ 0.19
PFDN6O15212 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.24■□□□□ 0.19
PFDN6O15212 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.24■□□□□ 0.19
PFDN6O15212 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN6O15212 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
PFDN6O15212 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PFDN6O15212 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN6O15212 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN6O15212 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms