Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SEMA3EO15041 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.32■□□□□ 0.68
SEMA3EO15041 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
SEMA3EO15041 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SEMA3EO15041 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.32■□□□□ 0.68
SEMA3EO15041 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SEMA3EO15041 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SEMA3EO15041 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SEMA3EO15041 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SEMA3EO15041 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.32■□□□□ 0.68
SEMA3EO15041 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SEMA3EO15041 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEMA3EO15041 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.31■□□□□ 0.68
SEMA3EO15041 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
SEMA3EO15041 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SEMA3EO15041 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SEMA3EO15041 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SEMA3EO15041 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SEMA3EO15041 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEMA3EO15041 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEMA3EO15041 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEMA3EO15041 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEMA3EO15041 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SEMA3EO15041 TOMM22P5-201ENST00000416399 439 ntBASIC19.31■□□□□ 0.68
SEMA3EO15041 ELK1P1-201ENST00000485699 580 ntBASIC19.31■□□□□ 0.68
SEMA3EO15041 AC011495.1-201ENST00000498085 584 ntBASIC19.31■□□□□ 0.68
SEMA3EO15041 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.31■□□□□ 0.68
SEMA3EO15041 HNRNPUP1-201ENST00000554987 333 ntBASIC19.31■□□□□ 0.68
SEMA3EO15041 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SEMA3EO15041 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.31■□□□□ 0.68
SEMA3EO15041 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SEMA3EO15041 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.31■□□□□ 0.68
SEMA3EO15041 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SEMA3EO15041 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.31■□□□□ 0.68
SEMA3EO15041 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.31■□□□□ 0.68
SEMA3EO15041 AL158212.4-201ENST00000624062 1286 ntBASIC19.31■□□□□ 0.68
SEMA3EO15041 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SEMA3EO15041 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEMA3EO15041 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.31■□□□□ 0.68
SEMA3EO15041 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SEMA3EO15041 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SEMA3EO15041 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SEMA3EO15041 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEMA3EO15041 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEMA3EO15041 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEMA3EO15041 MTHFR-217ENST00000641820 1569 ntBASIC19.31■□□□□ 0.68
SEMA3EO15041 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEMA3EO15041 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.31■□□□□ 0.68
SEMA3EO15041 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEMA3EO15041 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SEMA3EO15041 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEMA3EO15041 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SEMA3EO15041 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SEMA3EO15041 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEMA3EO15041 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
SEMA3EO15041 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
SEMA3EO15041 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SEMA3EO15041 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEMA3EO15041 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.3■□□□□ 0.68
SEMA3EO15041 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
SEMA3EO15041 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SEMA3EO15041 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
SEMA3EO15041 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SEMA3EO15041 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.3■□□□□ 0.68
SEMA3EO15041 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.3■□□□□ 0.68
SEMA3EO15041 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.3■□□□□ 0.68
SEMA3EO15041 RN7SL752P-201ENST00000463779 287 ntBASIC19.3■□□□□ 0.68
SEMA3EO15041 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.3■□□□□ 0.68
SEMA3EO15041 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SEMA3EO15041 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.3■□□□□ 0.68
SEMA3EO15041 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.3■□□□□ 0.68
SEMA3EO15041 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SEMA3EO15041 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.3■□□□□ 0.68
SEMA3EO15041 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEMA3EO15041 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.3■□□□□ 0.68
SEMA3EO15041 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEMA3EO15041 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEMA3EO15041 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEMA3EO15041 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEMA3EO15041 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SEMA3EO15041 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEMA3EO15041 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SEMA3EO15041 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SEMA3EO15041 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.29■□□□□ 0.68
SEMA3EO15041 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.29■□□□□ 0.68
SEMA3EO15041 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.29■□□□□ 0.68
SEMA3EO15041 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms