Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 TTTY23B-201ENST00000442790 549 ntBASIC18.65■□□□□ 0.58
USP17L11C9JVI0 POU5F1P6-201ENST00000466990 990 ntBASIC18.65■□□□□ 0.58
USP17L11C9JVI0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 RAB43P1-201ENST00000561790 589 ntBASIC18.65■□□□□ 0.58
USP17L11C9JVI0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 TMEM261P1-201ENST00000604899 340 ntBASIC18.65■□□□□ 0.58
USP17L11C9JVI0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP17L11C9JVI0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP17L11C9JVI0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP17L11C9JVI0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.64■□□□□ 0.58
USP17L11C9JVI0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
USP17L11C9JVI0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
USP17L11C9JVI0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 RARRES2P5-201ENST00000564013 466 ntBASIC18.64■□□□□ 0.57
USP17L11C9JVI0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 REXO1L8P-201ENST00000604378 1897 ntBASIC18.64■□□□□ 0.57
USP17L11C9JVI0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
USP17L11C9JVI0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 WFDC1-204ENST00000613603 549 ntBASIC18.63■□□□□ 0.57
USP17L11C9JVI0 MIR6805-201ENST00000615055 62 ntBASIC18.63■□□□□ 0.57
USP17L11C9JVI0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
USP17L11C9JVI0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP17L11C9JVI0 PCDH8P1-201ENST00000428983 2773 ntBASIC18.62■□□□□ 0.57
USP17L11C9JVI0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP17L11C9JVI0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP17L11C9JVI0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP17L11C9JVI0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP17L11C9JVI0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP17L11C9JVI0 MIR1909-201ENST00000411312 80 ntBASIC18.62■□□□□ 0.57
USP17L11C9JVI0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms