Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 MROH4P-201ENST00000431302 1578 ntBASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRDV1A0A1B0GX56 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 KRT8P44-201ENST00000441609 1350 ntBASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 AL596275.1-201ENST00000423464 877 ntBASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 AC104076.2-201ENST00000448912 469 ntBASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 AC092329.2-201ENST00000598402 547 ntBASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRDV1A0A1B0GX56 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRDV1A0A1B0GX56 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRDV1A0A1B0GX56 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRDV1A0A1B0GX56 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRDV1A0A1B0GX56 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRDV1A0A1B0GX56 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
TRDV1A0A1B0GX56 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRDV1A0A1B0GX56 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRDV1A0A1B0GX56 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.23□□□□□ -0.13
TRDV1A0A1B0GX56 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRDV1A0A1B0GX56 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
TRDV1A0A1B0GX56 AC129492.6-201ENST00000611383 1305 ntBASIC14.23□□□□□ -0.13
TRDV1A0A1B0GX56 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.23□□□□□ -0.13
TRDV1A0A1B0GX56 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRDV1A0A1B0GX56 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRDV1A0A1B0GX56 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms