Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 AC090340.1-201ENST00000620778 4980 ntBASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 BNIP3P1-202ENST00000550043 1585 ntBASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 KRT18P64-201ENST00000434946 1219 ntBASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 AC007551.1-201ENST00000457394 519 ntBASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 POU5F1P6-201ENST00000466990 990 ntBASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 AL592424.1-201ENST00000563624 1536 ntBASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
HCFC2Q9Y5Z7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 C1QBPP1-201ENST00000400117 770 ntBASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 FTH1P14-201ENST00000482930 551 ntBASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 AL049840.4-201ENST00000602422 811 ntBASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HCFC2Q9Y5Z7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 HLA-A-202ENST00000376806 1854 ntBASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 HAUS4P1-201ENST00000406739 1145 ntBASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 BAATP1-201ENST00000412284 1225 ntBASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 AC099548.2-209ENST00000480264 625 ntBASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms