Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LHX6Q9UPM6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
LHX6Q9UPM6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LHX6Q9UPM6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LHX6Q9UPM6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
LHX6Q9UPM6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LHX6Q9UPM6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LHX6Q9UPM6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
LHX6Q9UPM6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LHX6Q9UPM6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LHX6Q9UPM6 AL355578.1-201ENST00000607405 1328 ntBASIC15.41■□□□□ 0.06
LHX6Q9UPM6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LHX6Q9UPM6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 FABP5-201ENST00000297258 851 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 FO681548.1-201ENST00000455617 1132 ntBASIC15.4■□□□□ 0.06
LHX6Q9UPM6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 ZNF767P-206ENST00000513792 565 ntBASIC15.4■□□□□ 0.06
LHX6Q9UPM6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 SRPK2P-201ENST00000523408 1100 ntBASIC15.4■□□□□ 0.06
LHX6Q9UPM6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 MIR4722-201ENST00000578292 60 ntBASIC15.4■□□□□ 0.06
LHX6Q9UPM6 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 AC093726.1-201ENST00000608064 963 ntBASIC15.4■□□□□ 0.06
LHX6Q9UPM6 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.4■□□□□ 0.06
LHX6Q9UPM6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.4■□□□□ 0.06
LHX6Q9UPM6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 MAPK10-379ENST00000642013 1385 ntBASIC15.39■□□□□ 0.05
LHX6Q9UPM6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 RNU1-129P-201ENST00000384064 167 ntBASIC15.39■□□□□ 0.05
LHX6Q9UPM6 CT45A11P-201ENST00000448043 1134 ntBASIC15.39■□□□□ 0.05
LHX6Q9UPM6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.39■□□□□ 0.05
LHX6Q9UPM6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 AC044860.1-202ENST00000559481 777 ntBASIC15.39■□□□□ 0.05
LHX6Q9UPM6 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 AC104072.1-201ENST00000568817 668 ntBASIC15.39■□□□□ 0.05
LHX6Q9UPM6 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 U1.21-201ENST00000580816 167 ntBASIC15.39■□□□□ 0.05
LHX6Q9UPM6 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 AC010319.3-201ENST00000597028 470 ntBASIC15.39■□□□□ 0.05
LHX6Q9UPM6 AC233724.13-201ENST00000598383 410 ntBASIC15.39■□□□□ 0.05
LHX6Q9UPM6 AC006963.1-201ENST00000624003 1052 ntBASIC15.39■□□□□ 0.05
LHX6Q9UPM6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.39■□□□□ 0.05
LHX6Q9UPM6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LHX6Q9UPM6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LHX6Q9UPM6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LHX6Q9UPM6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LHX6Q9UPM6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LHX6Q9UPM6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.38■□□□□ 0.05
LHX6Q9UPM6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.38■□□□□ 0.05
LHX6Q9UPM6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LHX6Q9UPM6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LHX6Q9UPM6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms