Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 GK-202ENST00000378941 458 ntTSL 3 BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 RNA5SP410-201ENST00000516285 106 ntBASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 AC105021.1-202ENST00000570572 669 ntBASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 AC008738.7-201ENST00000609744 511 ntBASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC6Q9UBN7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 AC087499.5-201ENST00000452760 1342 ntBASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 ALOX12P2-203ENST00000570921 1945 ntBASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 AL596325.1-201ENST00000563991 1082 ntBASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 AL844908.2-201ENST00000609461 460 ntBASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC6Q9UBN7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 HLA-A-202ENST00000376806 1854 ntBASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 AL133215.2-201ENST00000609242 977 ntBASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 AL358472.5-202ENST00000641448 1267 ntBASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.27■□□□□ 0.52
HDAC6Q9UBN7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HDAC6Q9UBN7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
HDAC6Q9UBN7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HDAC6Q9UBN7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.51
HDAC6Q9UBN7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HDAC6Q9UBN7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.27■□□□□ 0.51
HDAC6Q9UBN7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
HDAC6Q9UBN7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
HDAC6Q9UBN7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HDAC6Q9UBN7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms