Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HACD3Q9P035 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HACD3Q9P035 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.41■□□□□ 0.22
HACD3Q9P035 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.41■□□□□ 0.22
HACD3Q9P035 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.41■□□□□ 0.22
HACD3Q9P035 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
HACD3Q9P035 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
HACD3Q9P035 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HACD3Q9P035 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.41■□□□□ 0.22
HACD3Q9P035 SPCS2P4-201ENST00000436160 681 ntBASIC16.41■□□□□ 0.22
HACD3Q9P035 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.41■□□□□ 0.22
HACD3Q9P035 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HACD3Q9P035 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.41■□□□□ 0.22
HACD3Q9P035 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.41■□□□□ 0.22
HACD3Q9P035 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.41■□□□□ 0.22
HACD3Q9P035 AC105339.1-204ENST00000636249 355 ntBASIC16.41■□□□□ 0.22
HACD3Q9P035 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HACD3Q9P035 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HACD3Q9P035 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HACD3Q9P035 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.41■□□□□ 0.22
HACD3Q9P035 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HACD3Q9P035 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HACD3Q9P035 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.41■□□□□ 0.22
HACD3Q9P035 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HACD3Q9P035 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
HACD3Q9P035 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HACD3Q9P035 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.41■□□□□ 0.22
HACD3Q9P035 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HACD3Q9P035 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HACD3Q9P035 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HACD3Q9P035 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
HACD3Q9P035 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HACD3Q9P035 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HACD3Q9P035 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.4■□□□□ 0.22
HACD3Q9P035 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.4■□□□□ 0.22
HACD3Q9P035 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.4■□□□□ 0.22
HACD3Q9P035 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.4■□□□□ 0.22
HACD3Q9P035 AC092364.2-201ENST00000596710 2692 ntBASIC16.4■□□□□ 0.22
HACD3Q9P035 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HACD3Q9P035 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.4■□□□□ 0.22
HACD3Q9P035 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.4■□□□□ 0.22
HACD3Q9P035 AL592309.1-201ENST00000443127 649 ntBASIC16.4■□□□□ 0.22
HACD3Q9P035 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.4■□□□□ 0.22
HACD3Q9P035 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HACD3Q9P035 AP000344.2-201ENST00000512987 629 ntBASIC16.4■□□□□ 0.22
HACD3Q9P035 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.4■□□□□ 0.22
HACD3Q9P035 LINC01225-203ENST00000563550 1244 ntBASIC16.4■□□□□ 0.22
HACD3Q9P035 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.4■□□□□ 0.22
HACD3Q9P035 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
HACD3Q9P035 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.4■□□□□ 0.22
HACD3Q9P035 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.4■□□□□ 0.22
HACD3Q9P035 AC022145.2-201ENST00000598203 171 ntBASIC16.4■□□□□ 0.22
HACD3Q9P035 SPTSSB-204ENST00000617024 1292 ntBASIC16.4■□□□□ 0.22
HACD3Q9P035 AL513210.1-201ENST00000629608 234 ntBASIC16.4■□□□□ 0.22
HACD3Q9P035 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HACD3Q9P035 AC084121.4-201ENST00000641598 221 ntBASIC16.4■□□□□ 0.22
HACD3Q9P035 AF228730.8-201ENST00000642140 221 ntBASIC16.4■□□□□ 0.22
HACD3Q9P035 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HACD3Q9P035 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.4■□□□□ 0.22
HACD3Q9P035 NORAD-201ENST00000565493 5339 ntBASIC16.4■□□□□ 0.22
HACD3Q9P035 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HACD3Q9P035 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.4■□□□□ 0.22
HACD3Q9P035 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.4■□□□□ 0.22
HACD3Q9P035 AC103702.1-201ENST00000548801 2630 ntBASIC16.4■□□□□ 0.22
HACD3Q9P035 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.4■□□□□ 0.22
HACD3Q9P035 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.4■□□□□ 0.22
HACD3Q9P035 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HACD3Q9P035 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HACD3Q9P035 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.4■□□□□ 0.22
HACD3Q9P035 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
HACD3Q9P035 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.39■□□□□ 0.21
HACD3Q9P035 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HACD3Q9P035 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HACD3Q9P035 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms