Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 HIST3H2BA-201ENST00000436555 524 ntBASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 REXO1L1P-202ENST00000608646 1974 ntBASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 PCDHA1-201ENST00000378133 2726 ntBASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 AC100757.3-201ENST00000622361 1406 ntBASIC16.45■□□□□ 0.22
TMEM248Q9NWD8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 SERBP1P3-201ENST00000459980 809 ntBASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 IGHV3-42-201ENST00000520410 361 ntBASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 AC005498.2-205ENST00000593218 784 ntBASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TMEM248Q9NWD8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 AC010491.1-201ENST00000563101 2797 ntBASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 AC241585.1-201ENST00000433527 519 ntBASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 AL590560.3-201ENST00000623350 461 ntBASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TMEM248Q9NWD8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms