Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SALL1Q9NSC2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 RPL13P2-201ENST00000440687 659 ntBASIC19.34■□□□□ 0.69
SALL1Q9NSC2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 MEIS3P1-201ENST00000495167 958 ntBASIC19.34■□□□□ 0.69
SALL1Q9NSC2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.34■□□□□ 0.69
SALL1Q9NSC2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
SALL1Q9NSC2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.33■□□□□ 0.69
SALL1Q9NSC2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 AP006294.1-201ENST00000415407 339 ntBASIC19.33■□□□□ 0.69
SALL1Q9NSC2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SALL1Q9NSC2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SALL1Q9NSC2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SALL1Q9NSC2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.33■□□□□ 0.68
SALL1Q9NSC2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SALL1Q9NSC2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.33■□□□□ 0.68
SALL1Q9NSC2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SALL1Q9NSC2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SALL1Q9NSC2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SALL1Q9NSC2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.33■□□□□ 0.68
SALL1Q9NSC2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.33■□□□□ 0.68
SALL1Q9NSC2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SALL1Q9NSC2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.33■□□□□ 0.68
SALL1Q9NSC2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SALL1Q9NSC2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 RARRES2P5-201ENST00000564013 466 ntBASIC19.32■□□□□ 0.68
SALL1Q9NSC2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 AC093726.1-201ENST00000608064 963 ntBASIC19.32■□□□□ 0.68
SALL1Q9NSC2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL1Q9NSC2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms