Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 OR8S1-201ENST00000310194 1080 ntBASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 ELK1P1-201ENST00000485699 580 ntBASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 IGHV3-72-202ENST00000621503 303 ntBASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPHK2Q9NRA0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
SPHK2Q9NRA0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.39■□□□□ 0.22
SPHK2Q9NRA0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 AL512384.1-201ENST00000406683 331 ntBASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 AC098850.1-201ENST00000419919 790 ntBASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 GIMAP3P-201ENST00000495150 836 ntBASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 CTBP2P3-201ENST00000585629 1255 ntBASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPHK2Q9NRA0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 AC134407.2-201ENST00000625089 1978 ntBASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 RPL13P2-201ENST00000440687 659 ntBASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 TARDBPP1-201ENST00000442013 1203 ntBASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SPHK2Q9NRA0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms