Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 AL355994.2-201ENST00000447882 704 ntBASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 AC245100.5-201ENST00000452108 331 ntBASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 AC233724.13-201ENST00000598383 410 ntBASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 AC244093.1-201ENST00000610837 814 ntBASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 TUBB1P2-201ENST00000422712 1306 ntBASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 TUBB1P1-201ENST00000503144 1300 ntBASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.92■□□□□ 0.46
PDLIM7Q9NR12 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 AC006449.6-201ENST00000612330 2296 ntBASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 AC099336.1-201ENST00000417053 1171 ntBASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 KLF2P4-201ENST00000451959 1225 ntBASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 AL139010.1-201ENST00000454878 894 ntBASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 AC074044.1-201ENST00000609673 707 ntBASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms