Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.06■□□□□ 0.32
LRRC4Q9HBW1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC4Q9HBW1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC4Q9HBW1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LRRC4Q9HBW1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC4Q9HBW1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC4Q9HBW1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LRRC4Q9HBW1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC4Q9HBW1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC4Q9HBW1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LRRC4Q9HBW1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LRRC4Q9HBW1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC4Q9HBW1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC4Q9HBW1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 AL035456.1-201ENST00000456064 1369 ntBASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 AC105021.1-202ENST00000570572 669 ntBASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 CYP2T1P-202ENST00000641596 2535 ntBASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
LRRC4Q9HBW1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 AC107890.1-201ENST00000422478 521 ntBASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 MTND6P24-201ENST00000440466 518 ntBASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 AL139010.1-201ENST00000454878 894 ntBASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 AC051619.7-201ENST00000568314 623 ntBASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC4Q9HBW1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms