Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 AL627223.1-201ENST00000416693 442 ntBASIC14.2□□□□□ -0.14
CDH20Q9HBT6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 SPTSSB-204ENST00000617024 1292 ntBASIC14.2□□□□□ -0.14
CDH20Q9HBT6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 AC023141.5-201ENST00000458585 616 ntBASIC14.19□□□□□ -0.14
CDH20Q9HBT6 AC098859.1-201ENST00000502915 1238 ntBASIC14.19□□□□□ -0.14
CDH20Q9HBT6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 AC006538.3-201ENST00000612495 578 ntBASIC14.19□□□□□ -0.14
CDH20Q9HBT6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH20Q9HBT6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH20Q9HBT6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms