Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 SPDYE10P-202ENST00000612005 668 ntBASIC14.48□□□□□ -0.09
NELFAQ9H3P2 SPDYE8P-202ENST00000612377 668 ntBASIC14.48□□□□□ -0.09
NELFAQ9H3P2 AL691403.2-201ENST00000618460 490 ntBASIC14.48□□□□□ -0.09
NELFAQ9H3P2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 AC103702.1-201ENST00000548801 2630 ntBASIC14.48□□□□□ -0.09
NELFAQ9H3P2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NELFAQ9H3P2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 AL592424.1-201ENST00000563624 1536 ntBASIC14.47□□□□□ -0.09
NELFAQ9H3P2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 SPCS2P4-201ENST00000436160 681 ntBASIC14.47□□□□□ -0.09
NELFAQ9H3P2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 DNAJB3-202ENST00000449667 1266 ntBASIC14.47□□□□□ -0.09
NELFAQ9H3P2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 AP000344.2-201ENST00000512987 629 ntBASIC14.47□□□□□ -0.09
NELFAQ9H3P2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 LINC01225-203ENST00000563550 1244 ntBASIC14.47□□□□□ -0.09
NELFAQ9H3P2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.47□□□□□ -0.09
NELFAQ9H3P2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NELFAQ9H3P2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 AC254562.1-201ENST00000417586 456 ntBASIC14.46□□□□□ -0.09
NELFAQ9H3P2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 AC093724.1-201ENST00000448659 1027 ntBASIC14.46□□□□□ -0.09
NELFAQ9H3P2 AC069335.1-201ENST00000489972 472 ntBASIC14.46□□□□□ -0.09
NELFAQ9H3P2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NELFAQ9H3P2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms