Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 KRT18P32-201ENST00000424695 1287 ntBASIC15.03■□□□□ -0
UBQLN3Q9H347 POU5F1P6-201ENST00000466990 990 ntBASIC15.03■□□□□ -0
UBQLN3Q9H347 AC109322.1-201ENST00000524499 1264 ntBASIC15.03■□□□□ -0
UBQLN3Q9H347 AL138918.1-201ENST00000568306 659 ntBASIC15.03■□□□□ -0
UBQLN3Q9H347 AP000842.3-202ENST00000569238 1080 ntBASIC15.03■□□□□ -0
UBQLN3Q9H347 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.03■□□□□ -0
UBQLN3Q9H347 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.03■□□□□ -0
UBQLN3Q9H347 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 AC073389.1-201ENST00000595595 795 ntBASIC15.03■□□□□ -0
UBQLN3Q9H347 LINC00628-201ENST00000628516 1289 ntBASIC15.03■□□□□ -0
UBQLN3Q9H347 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.03■□□□□ -0
UBQLN3Q9H347 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
UBQLN3Q9H347 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
UBQLN3Q9H347 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.03■□□□□ -0
UBQLN3Q9H347 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
UBQLN3Q9H347 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.02■□□□□ -0
UBQLN3Q9H347 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 LINC00554-201ENST00000564841 3011 ntBASIC15.02■□□□□ -0
UBQLN3Q9H347 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 REXO1L8P-201ENST00000604378 1897 ntBASIC15.02■□□□□ -0
UBQLN3Q9H347 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.02■□□□□ -0
UBQLN3Q9H347 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
UBQLN3Q9H347 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.02■□□□□ -0
UBQLN3Q9H347 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
UBQLN3Q9H347 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.02■□□□□ -0
UBQLN3Q9H347 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.02■□□□□ -0
UBQLN3Q9H347 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
UBQLN3Q9H347 RFPL4AP1-201ENST00000530883 850 ntBASIC15.02■□□□□ -0
UBQLN3Q9H347 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.02■□□□□ -0
UBQLN3Q9H347 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
UBQLN3Q9H347 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.02■□□□□ -0
UBQLN3Q9H347 AC027796.2-201ENST00000575326 344 ntBASIC15.02■□□□□ -0
UBQLN3Q9H347 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.02■□□□□ -0
UBQLN3Q9H347 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.02■□□□□ -0
UBQLN3Q9H347 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.02■□□□□ -0
UBQLN3Q9H347 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.02■□□□□ -0
UBQLN3Q9H347 AC093028.1-201ENST00000622998 982 ntBASIC15.02■□□□□ -0
UBQLN3Q9H347 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.02■□□□□ -0
UBQLN3Q9H347 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
UBQLN3Q9H347 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.02□□□□□ -0.01
UBQLN3Q9H347 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
UBQLN3Q9H347 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
UBQLN3Q9H347 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
UBQLN3Q9H347 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
UBQLN3Q9H347 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBQLN3Q9H347 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBQLN3Q9H347 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBQLN3Q9H347 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
UBQLN3Q9H347 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.02□□□□□ -0.01
UBQLN3Q9H347 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBQLN3Q9H347 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBQLN3Q9H347 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.02□□□□□ -0.01
UBQLN3Q9H347 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.02□□□□□ -0.01
UBQLN3Q9H347 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
UBQLN3Q9H347 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.02□□□□□ -0.01
UBQLN3Q9H347 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.02□□□□□ -0.01
UBQLN3Q9H347 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.01□□□□□ -0.01
UBQLN3Q9H347 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms