Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 CNOT3-202ENST00000358389 4118 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.687e-6■□□□□ 10.1
XRN2Q9H0D6 QARS-201ENST00000306125 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.692e-6■□□□□ 10.1
XRN2Q9H0D6 STAT2-210ENST00000557235 3073 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.862e-6■□□□□ 10.1
XRN2Q9H0D6 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.882e-6■□□□□ 10.1
XRN2Q9H0D6 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC9.58□□□□□ -0.882e-6■□□□□ 10.1
XRN2Q9H0D6 NOP56-208ENST00000467857 735 ntTSL 29.42□□□□□ -0.94e-14■□□□□ 10.1
XRN2Q9H0D6 SUMO2-202ENST00000420826 3190 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.932e-6■□□□□ 10.1
XRN2Q9H0D6 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC9□□□□□ -0.972e-6■□□□□ 10.1
XRN2Q9H0D6 CDC14B-205ENST00000415608 684 ntTSL 58.8□□□□□ -12e-6■□□□□ 10.1
XRN2Q9H0D6 NOP56-211ENST00000471023 592 ntTSL 28.74□□□□□ -1.014e-14■□□□□ 10.1
XRN2Q9H0D6 QARS-250ENST00000637281 1327 ntTSL 58.38□□□□□ -1.072e-6■□□□□ 10.1
XRN2Q9H0D6 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC8.21□□□□□ -1.12e-6■□□□□ 10.1
XRN2Q9H0D6 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.122e-6■□□□□ 10.1
XRN2Q9H0D6 STX16-NPEPL1-201ENST00000413559 557 ntTSL 37.91□□□□□ -1.142e-6■□□□□ 10.1
XRN2Q9H0D6 MSI2-214ENST00000581776 493 ntTSL 27.3□□□□□ -1.242e-6■□□□□ 10.1
XRN2Q9H0D6 QARS-219ENST00000482468 402 ntTSL 26.9□□□□□ -1.32e-6■□□□□ 10.1
XRN2Q9H0D6 XPO1-205ENST00000422552 382 ntTSL 55.75□□□□□ -1.492e-6■□□□□ 10.1
XRN2Q9H0D6 XPO1-224ENST00000495003 568 ntTSL 24.9□□□□□ -1.632e-6■□□□□ 10.1
XRN2Q9H0D6 XPO1-204ENST00000420673 682 ntTSL 24.49□□□□□ -1.692e-6■□□□□ 10.1
XRN2Q9H0D6 XPO1-210ENST00000449444 579 ntTSL 44.34□□□□□ -1.712e-6■□□□□ 10.1
XRN2Q9H0D6 MSI2-212ENST00000579590 452 ntTSL 54.31□□□□□ -1.722e-6■□□□□ 10.1
XRN2Q9H0D6 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.18■□□□□ 0.181e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-222ENST00000451607 1007 ntTSL 5 BASIC12.63□□□□□ -0.391e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-214ENST00000436656 822 ntTSL 311.3□□□□□ -0.61e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-216ENST00000443799 897 ntTSL 511.3□□□□□ -0.61e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-224ENST00000454068 688 ntTSL 5 BASIC11.18□□□□□ -0.621e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-203ENST00000416952 799 ntTSL 211.08□□□□□ -0.641e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-210ENST00000431268 1698 ntTSL 210.3□□□□□ -0.761e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-219ENST00000449289 542 ntTSL 3 BASIC9.4□□□□□ -0.91e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-220ENST00000449589 712 ntTSL 39.4□□□□□ -0.91e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-226ENST00000455838 632 ntTSL 29.4□□□□□ -0.91e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.92□□□□□ -0.981e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-227ENST00000456293 583 ntTSL 38.41□□□□□ -1.061e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-228ENST00000456812 723 ntTSL 38.01□□□□□ -1.131e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.02□□□□□ -1.291e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-206ENST00000422183 745 ntTSL 26.75□□□□□ -1.331e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-201ENST00000412059 979 ntTSL 56.67□□□□□ -1.341e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-204ENST00000421068 1060 ntTSL 26.13□□□□□ -1.431e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.52□□□□□ -1.531e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-205ENST00000422008 497 ntTSL 35.21□□□□□ -1.581e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-215ENST00000442067 1114 ntTSL 25.1□□□□□ -1.591e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.38□□□□□ -1.711e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-213ENST00000436285 772 ntTSL 23.87□□□□□ -1.791e-8■□□□□ 10.1
XRN2Q9H0D6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.98□□□□□ -1.931e-8■□□□□ 10.1
XRN2Q9H0D6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.79□□□□□ -0.042e-6■□□□□ 10.1
XRN2Q9H0D6 ANKRD11-218ENST00000623388 2239 nt17.16■□□□□ 0.347e-7■□□□□ 10.1
XRN2Q9H0D6 SLC43A1-210ENST00000534105 580 ntTSL 520.63■□□□□ 0.897e-8■□□□□ 10.1
XRN2Q9H0D6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.182e-9■□□□□ 10
XRN2Q9H0D6 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.12e-9■□□□□ 10
XRN2Q9H0D6 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC14.09□□□□□ -0.152e-9■□□□□ 10
XRN2Q9H0D6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.618e-8■□□□□ 10
XRN2Q9H0D6 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.048e-8■□□□□ 10
XRN2Q9H0D6 PROC-207ENST00000431364 566 ntTSL 415.11■□□□□ 0.017e-8■□□□□ 10
XRN2Q9H0D6 PROC-205ENST00000427769 598 ntTSL 413.14□□□□□ -0.317e-8■□□□□ 10
XRN2Q9H0D6 ASPSCR1-220ENST00000585140 447 ntTSL 322.63■■□□□ 1.212e-34■□□□□ 10
XRN2Q9H0D6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.51■■□□□ 1.353e-7■□□□□ 10
XRN2Q9H0D6 C20orf204-202ENST00000431158 2954 ntTSL 1 (best)16.1■□□□□ 0.173e-7■□□□□ 10
XRN2Q9H0D6 C20orf204-203ENST00000444463 4303 ntTSL 1 (best)15.52■□□□□ 0.083e-7■□□□□ 10
XRN2Q9H0D6 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.9□□□□□ -1.33e-10■□□□□ 10
XRN2Q9H0D6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC28.06■■■□□ 2.083e-8■□□□□ 10
XRN2Q9H0D6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.9■■□□□ 1.423e-8■□□□□ 10
XRN2Q9H0D6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.323e-8■□□□□ 10
XRN2Q9H0D6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.98■■□□□ 1.113e-8■□□□□ 10
XRN2Q9H0D6 PYCR1-214ENST00000585215 767 ntTSL 420.47■□□□□ 0.873e-8■□□□□ 10
XRN2Q9H0D6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.9■□□□□ 0.783e-8■□□□□ 10
XRN2Q9H0D6 PYCR1-205ENST00000405481 841 ntTSL 217.98■□□□□ 0.473e-8■□□□□ 10
XRN2Q9H0D6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.383e-8■□□□□ 10
XRN2Q9H0D6 PYCR1-211ENST00000582198 868 ntTSL 516.43■□□□□ 0.223e-8■□□□□ 10
XRN2Q9H0D6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.381e-12■□□□□ 10
XRN2Q9H0D6 DENND5A-211ENST00000530780 611 ntTSL 323.05■■□□□ 1.281e-12■□□□□ 10
XRN2Q9H0D6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.241e-12■□□□□ 10
XRN2Q9H0D6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.11e-12■□□□□ 10
XRN2Q9H0D6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.911e-12■□□□□ 10
XRN2Q9H0D6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.821e-12■□□□□ 10
XRN2Q9H0D6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.821e-12■□□□□ 10
XRN2Q9H0D6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.811e-12■□□□□ 10
XRN2Q9H0D6 DENND5A-205ENST00000526707 2861 ntTSL 218.51■□□□□ 0.551e-12■□□□□ 10
XRN2Q9H0D6 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.071e-12■□□□□ 10
XRN2Q9H0D6 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.071e-12■□□□□ 10
XRN2Q9H0D6 DENND5A-210ENST00000530044 4060 ntTSL 2 BASIC11.21□□□□□ -0.611e-12■□□□□ 10
XRN2Q9H0D6 FBXO17-205ENST00000599418 2222 ntTSL 217.12■□□□□ 0.332e-7■□□□□ 10
XRN2Q9H0D6 FBXO17-204ENST00000597696 932 ntTSL 216.28■□□□□ 0.22e-7■□□□□ 10
XRN2Q9H0D6 NOP56-220ENST00000616692 2662 ntTSL 1 (best)16.17■□□□□ 0.182e-11■□□□□ 10
XRN2Q9H0D6 NOP56-219ENST00000612233 2980 nt14.01□□□□□ -0.172e-11■□□□□ 10
XRN2Q9H0D6 NOP56-202ENST00000415272 1628 ntTSL 511.89□□□□□ -0.512e-11■□□□□ 10
XRN2Q9H0D6 NOP56-207ENST00000467196 1320 ntTSL 510.58□□□□□ -0.722e-11■□□□□ 10
XRN2Q9H0D6 PNPLA2-202ENST00000525250 2726 ntTSL 218.85■□□□□ 0.616e-7■□□□□ 10
XRN2Q9H0D6 LENG8-203ENST00000421200 594 ntTSL 317.91■□□□□ 0.462e-39■□□□□ 10
XRN2Q9H0D6 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.097e-18■□□□□ 10
XRN2Q9H0D6 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.117e-18■□□□□ 10
XRN2Q9H0D6 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.127e-18■□□□□ 10
XRN2Q9H0D6 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.127e-18■□□□□ 10
XRN2Q9H0D6 RNU1-136P-201ENST00000384181 164 ntBASIC5.93□□□□□ -1.467e-18■□□□□ 10
XRN2Q9H0D6 FBXO17-203ENST00000596025 935 ntTSL 223.41■■□□□ 1.342e-7■□□□□ 10
XRN2Q9H0D6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.342e-7■□□□□ 10
XRN2Q9H0D6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.962e-7■□□□□ 10
XRN2Q9H0D6 FBXO17-206ENST00000599598 510 ntTSL 517.65■□□□□ 0.422e-7■□□□□ 10
XRN2Q9H0D6 FBXO17-207ENST00000601394 2366 ntTSL 516.43■□□□□ 0.222e-7■□□□□ 10
XRN2Q9H0D6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.072e-7■□□□□ 10
XRN2Q9H0D6 SQSTM1-206ENST00000466342 808 ntTSL 214.73□□□□□ -0.053e-7■□□□□ 10
Retrieved 100 of 21,068 protein–RNA pairs in 92 ms