Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRC3Q9BY71 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.8■□□□□ 0.28
LRRC3Q9BY71 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 ARSEP1-201ENST00000420443 635 ntBASIC16.8■□□□□ 0.28
LRRC3Q9BY71 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 RN7SL752P-201ENST00000463779 287 ntBASIC16.8■□□□□ 0.28
LRRC3Q9BY71 ELK1P1-201ENST00000485699 580 ntBASIC16.8■□□□□ 0.28
LRRC3Q9BY71 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 AL008721.1-201ENST00000609964 604 ntBASIC16.8■□□□□ 0.28
LRRC3Q9BY71 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 Z97205.2-201ENST00000564697 1639 ntBASIC16.8■□□□□ 0.28
LRRC3Q9BY71 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3Q9BY71 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 AGGF1P2-201ENST00000426656 2106 ntBASIC16.79■□□□□ 0.28
LRRC3Q9BY71 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 AL512384.1-201ENST00000406683 331 ntBASIC16.79■□□□□ 0.28
LRRC3Q9BY71 MYCLP2-201ENST00000449268 967 ntBASIC16.79■□□□□ 0.28
LRRC3Q9BY71 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3Q9BY71 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 AC004987.2-201ENST00000395959 1148 ntBASIC16.78■□□□□ 0.28
LRRC3Q9BY71 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 AC245100.5-201ENST00000452108 331 ntBASIC16.78■□□□□ 0.28
LRRC3Q9BY71 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 AC123567.1-201ENST00000548294 1261 ntBASIC16.78■□□□□ 0.28
LRRC3Q9BY71 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
LRRC3Q9BY71 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms