Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 U82695.1-201ENST00000635752 1889 ntBASIC18.77■□□□□ 0.6
SLF1Q9BQI6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 AL596325.1-201ENST00000563991 1082 ntBASIC18.77■□□□□ 0.6
SLF1Q9BQI6 AC104794.3-201ENST00000566840 1248 ntBASIC18.77■□□□□ 0.6
SLF1Q9BQI6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLF1Q9BQI6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLF1Q9BQI6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SLF1Q9BQI6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SLF1Q9BQI6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLF1Q9BQI6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.77■□□□□ 0.59
SLF1Q9BQI6 AC007541.1-201ENST00000570282 1469 ntBASIC18.77■□□□□ 0.59
SLF1Q9BQI6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLF1Q9BQI6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
SLF1Q9BQI6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 RN7SL692P-201ENST00000464677 288 ntBASIC18.76■□□□□ 0.59
SLF1Q9BQI6 AL365330.1-201ENST00000607459 531 ntBASIC18.76■□□□□ 0.59
SLF1Q9BQI6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLF1Q9BQI6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 GNAQP1-201ENST00000444815 1067 ntBASIC18.75■□□□□ 0.59
SLF1Q9BQI6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 MIR4321-201ENST00000592276 80 ntBASIC18.75■□□□□ 0.59
SLF1Q9BQI6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.75■□□□□ 0.59
SLF1Q9BQI6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.75■□□□□ 0.59
SLF1Q9BQI6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLF1Q9BQI6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms