Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.64□□□□□ -0.39
TRGV9Q99603 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.64□□□□□ -0.39
TRGV9Q99603 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRGV9Q99603 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.64□□□□□ -0.39
TRGV9Q99603 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
TRGV9Q99603 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRGV9Q99603 AC144831.1-201ENST00000573312 2656 ntBASIC12.64□□□□□ -0.39
TRGV9Q99603 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRGV9Q99603 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TRGV9Q99603 VN2R19P-201ENST00000442399 1052 ntBASIC12.64□□□□□ -0.39
TRGV9Q99603 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.64□□□□□ -0.39
TRGV9Q99603 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
TRGV9Q99603 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
TRGV9Q99603 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.64□□□□□ -0.39
TRGV9Q99603 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.64□□□□□ -0.39
TRGV9Q99603 FAM215A-202ENST00000632077 792 ntBASIC12.64□□□□□ -0.39
TRGV9Q99603 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
TRGV9Q99603 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.64□□□□□ -0.39
TRGV9Q99603 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TRGV9Q99603 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV9Q99603 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TRGV9Q99603 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TRGV9Q99603 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.63□□□□□ -0.39
TRGV9Q99603 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.63□□□□□ -0.39
TRGV9Q99603 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.63□□□□□ -0.39
TRGV9Q99603 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 AC023157.3-201ENST00000619086 2088 ntBASIC12.63□□□□□ -0.39
TRGV9Q99603 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.63□□□□□ -0.39
TRGV9Q99603 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
TRGV9Q99603 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
TRGV9Q99603 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
TRGV9Q99603 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.63□□□□□ -0.39
TRGV9Q99603 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TRGV9Q99603 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRGV9Q99603 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.63□□□□□ -0.39
TRGV9Q99603 CRYGEP-201ENST00000412192 528 ntBASIC12.63□□□□□ -0.39
TRGV9Q99603 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.63□□□□□ -0.39
TRGV9Q99603 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.63□□□□□ -0.39
TRGV9Q99603 AC092910.1-201ENST00000482027 1129 ntBASIC12.63□□□□□ -0.39
TRGV9Q99603 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.63□□□□□ -0.39
TRGV9Q99603 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 UNC93B7-201ENST00000509439 705 ntBASIC12.63□□□□□ -0.39
TRGV9Q99603 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.63□□□□□ -0.39
TRGV9Q99603 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.63□□□□□ -0.39
TRGV9Q99603 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.63□□□□□ -0.39
TRGV9Q99603 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
TRGV9Q99603 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.63□□□□□ -0.39
TRGV9Q99603 MIR4321-201ENST00000592276 80 ntBASIC12.63□□□□□ -0.39
TRGV9Q99603 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TRGV9Q99603 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
TRGV9Q99603 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.63□□□□□ -0.39
TRGV9Q99603 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.63□□□□□ -0.39
TRGV9Q99603 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRGV9Q99603 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.63□□□□□ -0.39
TRGV9Q99603 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TRGV9Q99603 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRGV9Q99603 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TRGV9Q99603 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV9Q99603 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.63□□□□□ -0.39
TRGV9Q99603 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms