Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 PEG13-201ENST00000631594 5667 ntBASIC13.73□□□□□ -0.21
CLCC1Q96S66 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 SART3-203ENST00000546611 1184 ntBASIC13.72□□□□□ -0.21
CLCC1Q96S66 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 AL355877.3-201ENST00000622820 899 ntBASIC13.72□□□□□ -0.21
CLCC1Q96S66 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 AL022326.1-202ENST00000641533 845 ntBASIC13.72□□□□□ -0.21
CLCC1Q96S66 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLCC1Q96S66 HLA-A-202ENST00000376806 1854 ntBASIC13.72□□□□□ -0.21
CLCC1Q96S66 AL391256.1-201ENST00000443260 1855 ntBASIC13.72□□□□□ -0.21
CLCC1Q96S66 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.72□□□□□ -0.21
CLCC1Q96S66 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.71□□□□□ -0.21
CLCC1Q96S66 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLCC1Q96S66 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLCC1Q96S66 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLCC1Q96S66 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLCC1Q96S66 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLCC1Q96S66 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 AKR1C7P-201ENST00000305623 895 ntBASIC13.71□□□□□ -0.21
CLCC1Q96S66 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLCC1Q96S66 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLCC1Q96S66 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLCC1Q96S66 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLCC1Q96S66 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLCC1Q96S66 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLCC1Q96S66 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 SAPCD2P3-201ENST00000455031 850 ntBASIC13.71□□□□□ -0.21
CLCC1Q96S66 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 UNC93B7-201ENST00000509439 705 ntBASIC13.71□□□□□ -0.21
CLCC1Q96S66 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLCC1Q96S66 REXO1L6P-202ENST00000619970 1078 ntBASIC13.71□□□□□ -0.21
CLCC1Q96S66 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLCC1Q96S66 CICP14-201ENST00000629111 2732 ntBASIC13.71□□□□□ -0.21
CLCC1Q96S66 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.71□□□□□ -0.21
CLCC1Q96S66 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLCC1Q96S66 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLCC1Q96S66 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLCC1Q96S66 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CLCC1Q96S66 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms