Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NEK1Q96PY6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEK1Q96PY6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.13■□□□□ 0.65
NEK1Q96PY6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.13■□□□□ 0.65
NEK1Q96PY6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEK1Q96PY6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEK1Q96PY6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEK1Q96PY6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NEK1Q96PY6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.13■□□□□ 0.65
NEK1Q96PY6 FAM58DP-201ENST00000428076 619 ntBASIC19.13■□□□□ 0.65
NEK1Q96PY6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.13■□□□□ 0.65
NEK1Q96PY6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.13■□□□□ 0.65
NEK1Q96PY6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.13■□□□□ 0.65
NEK1Q96PY6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.13■□□□□ 0.65
NEK1Q96PY6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.13■□□□□ 0.65
NEK1Q96PY6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.13■□□□□ 0.65
NEK1Q96PY6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.13■□□□□ 0.65
NEK1Q96PY6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEK1Q96PY6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NEK1Q96PY6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEK1Q96PY6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEK1Q96PY6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.13■□□□□ 0.65
NEK1Q96PY6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEK1Q96PY6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.13■□□□□ 0.65
NEK1Q96PY6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEK1Q96PY6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEK1Q96PY6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.13■□□□□ 0.65
NEK1Q96PY6 AC011477.6-201ENST00000604980 1927 ntBASIC19.13■□□□□ 0.65
NEK1Q96PY6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEK1Q96PY6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEK1Q96PY6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEK1Q96PY6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.13■□□□□ 0.65
NEK1Q96PY6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEK1Q96PY6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 AC046158.3-201ENST00000624947 2558 ntBASIC19.12■□□□□ 0.65
NEK1Q96PY6 AC105917.1-201ENST00000506637 2539 ntBASIC19.12■□□□□ 0.65
NEK1Q96PY6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.12■□□□□ 0.65
NEK1Q96PY6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.12■□□□□ 0.65
NEK1Q96PY6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.12■□□□□ 0.65
NEK1Q96PY6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 AL691432.1-201ENST00000596308 1422 ntBASIC19.12■□□□□ 0.65
NEK1Q96PY6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.12■□□□□ 0.65
NEK1Q96PY6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.12■□□□□ 0.65
NEK1Q96PY6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.12■□□□□ 0.65
NEK1Q96PY6 AP000344.2-201ENST00000512987 629 ntBASIC19.12■□□□□ 0.65
NEK1Q96PY6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.12■□□□□ 0.65
NEK1Q96PY6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.12■□□□□ 0.65
NEK1Q96PY6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.12■□□□□ 0.65
NEK1Q96PY6 AC055717.3-201ENST00000622967 595 ntBASIC19.12■□□□□ 0.65
NEK1Q96PY6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.12■□□□□ 0.65
NEK1Q96PY6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NEK1Q96PY6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEK1Q96PY6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 AC211486.1-202ENST00000416371 468 ntBASIC19.11■□□□□ 0.65
NEK1Q96PY6 AL627223.1-201ENST00000416693 442 ntBASIC19.11■□□□□ 0.65
NEK1Q96PY6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 AC211476.1-201ENST00000503899 468 ntBASIC19.11■□□□□ 0.65
NEK1Q96PY6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms