Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 MIR1233-2-201ENST00000408138 82 ntBASIC16.72■□□□□ 0.27
C9orf72Q96LT7 MIR1233-1-201ENST00000408722 82 ntBASIC16.72■□□□□ 0.27
C9orf72Q96LT7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 RPS15P9-201ENST00000494093 319 ntBASIC16.72■□□□□ 0.27
C9orf72Q96LT7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 AC040169.1-201ENST00000565382 521 ntBASIC16.72■□□□□ 0.27
C9orf72Q96LT7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.72■□□□□ 0.27
C9orf72Q96LT7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 HCG4-201ENST00000418983 998 ntBASIC16.71■□□□□ 0.27
C9orf72Q96LT7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 AC008667.4-201ENST00000607370 168 ntBASIC16.71■□□□□ 0.27
C9orf72Q96LT7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
C9orf72Q96LT7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
C9orf72Q96LT7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
C9orf72Q96LT7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
C9orf72Q96LT7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
C9orf72Q96LT7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
C9orf72Q96LT7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
C9orf72Q96LT7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
C9orf72Q96LT7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.7■□□□□ 0.26
C9orf72Q96LT7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 IGHV3-65-201ENST00000523210 341 ntBASIC16.7■□□□□ 0.26
C9orf72Q96LT7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.7■□□□□ 0.26
C9orf72Q96LT7 AC064836.3-201ENST00000607928 673 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms