Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.42■□□□□ 0.38
LRCH3Q96II8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.42■□□□□ 0.38
LRCH3Q96II8 AC005702.4-201ENST00000618393 416 ntBASIC17.42■□□□□ 0.38
LRCH3Q96II8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH3Q96II8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH3Q96II8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH3Q96II8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH3Q96II8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH3Q96II8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.42■□□□□ 0.38
LRCH3Q96II8 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH3Q96II8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH3Q96II8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH3Q96II8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH3Q96II8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.42■□□□□ 0.38
LRCH3Q96II8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 RN7SL818P-201ENST00000485099 259 ntBASIC17.41■□□□□ 0.38
LRCH3Q96II8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 AC036164.1-201ENST00000570544 333 ntBASIC17.41■□□□□ 0.38
LRCH3Q96II8 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 AL049840.4-201ENST00000602422 811 ntBASIC17.41■□□□□ 0.38
LRCH3Q96II8 RN7SL725P-201ENST00000606439 259 ntBASIC17.41■□□□□ 0.38
LRCH3Q96II8 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.41■□□□□ 0.38
LRCH3Q96II8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 AC084018.2-201ENST00000613093 2607 ntBASIC17.41■□□□□ 0.38
LRCH3Q96II8 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH3Q96II8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LRCH3Q96II8 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH3Q96II8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LRCH3Q96II8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH3Q96II8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRCH3Q96II8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH3Q96II8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH3Q96II8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.4■□□□□ 0.38
LRCH3Q96II8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.4■□□□□ 0.38
LRCH3Q96II8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH3Q96II8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.4■□□□□ 0.38
LRCH3Q96II8 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH3Q96II8 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
LRCH3Q96II8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH3Q96II8 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH3Q96II8 KRT18P66-201ENST00000452970 1269 ntBASIC17.4■□□□□ 0.38
LRCH3Q96II8 AC090142.2-201ENST00000483263 416 ntBASIC17.4■□□□□ 0.38
LRCH3Q96II8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LRCH3Q96II8 AC245884.6-201ENST00000515672 1067 ntBASIC17.4■□□□□ 0.38
LRCH3Q96II8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRCH3Q96II8 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.4■□□□□ 0.38
LRCH3Q96II8 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRCH3Q96II8 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.4■□□□□ 0.38
LRCH3Q96II8 EEF1DP1-201ENST00000585891 896 ntBASIC17.4■□□□□ 0.38
LRCH3Q96II8 AC026979.3-201ENST00000607315 403 ntBASIC17.4■□□□□ 0.38
LRCH3Q96II8 AL391069.4-201ENST00000609583 481 ntBASIC17.4■□□□□ 0.38
LRCH3Q96II8 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.4■□□□□ 0.38
LRCH3Q96II8 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC17.4■□□□□ 0.38
LRCH3Q96II8 AC091812.3-201ENST00000621362 345 ntBASIC17.4■□□□□ 0.38
LRCH3Q96II8 CASP16P-204ENST00000635032 809 ntBASIC17.4■□□□□ 0.38
LRCH3Q96II8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LRCH3Q96II8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH3Q96II8 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH3Q96II8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH3Q96II8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.4■□□□□ 0.38
LRCH3Q96II8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.4■□□□□ 0.38
LRCH3Q96II8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH3Q96II8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH3Q96II8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
LRCH3Q96II8 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms