Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 AC092384.3-202ENST00000564646 2873 ntBASIC14.15□□□□□ -0.14
CPNE2Q96FN4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE2Q96FN4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CPNE2Q96FN4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 AC073621.1-201ENST00000392730 636 ntBASIC14.14□□□□□ -0.15
CPNE2Q96FN4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 MIR1224-201ENST00000408193 85 ntBASIC14.14□□□□□ -0.15
CPNE2Q96FN4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 PMS2P4-201ENST00000412466 1052 ntBASIC14.14□□□□□ -0.15
CPNE2Q96FN4 AF186996.4-201ENST00000467186 377 ntBASIC14.14□□□□□ -0.15
CPNE2Q96FN4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 AL160237.2-201ENST00000556165 472 ntBASIC14.14□□□□□ -0.15
CPNE2Q96FN4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 AC105339.3-201ENST00000560043 636 ntBASIC14.14□□□□□ -0.15
CPNE2Q96FN4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 MIR4515-201ENST00000584082 81 ntBASIC14.14□□□□□ -0.15
CPNE2Q96FN4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 AL356488.2-201ENST00000602755 427 ntBASIC14.14□□□□□ -0.15
CPNE2Q96FN4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 AL645728.2-201ENST00000641974 660 ntBASIC14.14□□□□□ -0.15
CPNE2Q96FN4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE2Q96FN4 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE2Q96FN4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms