Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC243562.1-201ENST00000560672 389 ntBASIC16.46■□□□□ 0.23
RTP4Q96DX8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 LINC01225-203ENST00000563550 1244 ntBASIC16.46■□□□□ 0.23
RTP4Q96DX8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTP4Q96DX8 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTP4Q96DX8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTP4Q96DX8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTP4Q96DX8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.46■□□□□ 0.23
RTP4Q96DX8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTP4Q96DX8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
RTP4Q96DX8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RTP4Q96DX8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RTP4Q96DX8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RTP4Q96DX8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.46■□□□□ 0.22
RTP4Q96DX8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RTP4Q96DX8 KRT18P28-201ENST00000453838 1332 ntBASIC16.45■□□□□ 0.22
RTP4Q96DX8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.45■□□□□ 0.22
RTP4Q96DX8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RTP4Q96DX8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RTP4Q96DX8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RTP4Q96DX8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.45■□□□□ 0.22
RTP4Q96DX8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.45■□□□□ 0.22
RTP4Q96DX8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RTP4Q96DX8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 FAM58CP-201ENST00000435741 640 ntBASIC16.45■□□□□ 0.22
RTP4Q96DX8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.45■□□□□ 0.22
RTP4Q96DX8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.45■□□□□ 0.22
RTP4Q96DX8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.45■□□□□ 0.22
RTP4Q96DX8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RTP4Q96DX8 BNIP3P1-202ENST00000550043 1585 ntBASIC16.45■□□□□ 0.22
RTP4Q96DX8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.45■□□□□ 0.22
RTP4Q96DX8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
RTP4Q96DX8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.45■□□□□ 0.22
RTP4Q96DX8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RTP4Q96DX8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.45■□□□□ 0.22
RTP4Q96DX8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 ELL2P1-201ENST00000413990 1906 ntBASIC16.45■□□□□ 0.22
RTP4Q96DX8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.45■□□□□ 0.22
RTP4Q96DX8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.45■□□□□ 0.22
RTP4Q96DX8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTP4Q96DX8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTP4Q96DX8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 AC092850.2-201ENST00000623821 2697 ntBASIC16.44■□□□□ 0.22
RTP4Q96DX8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTP4Q96DX8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTP4Q96DX8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTP4Q96DX8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTP4Q96DX8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTP4Q96DX8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTP4Q96DX8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTP4Q96DX8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTP4Q96DX8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTP4Q96DX8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 METTL21AP1-201ENST00000438852 635 ntBASIC16.44■□□□□ 0.22
RTP4Q96DX8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 AP000842.3-202ENST00000569238 1080 ntBASIC16.44■□□□□ 0.22
RTP4Q96DX8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTP4Q96DX8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 AC084121.4-201ENST00000641598 221 ntBASIC16.44■□□□□ 0.22
RTP4Q96DX8 AF228730.8-201ENST00000642140 221 ntBASIC16.44■□□□□ 0.22
RTP4Q96DX8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms