Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 SNX18-202ENST00000343017 3140 ntBASIC14.41□□□□□ -0.1
RFT1Q96AA3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 SSR4P1-203ENST00000599569 2260 ntBASIC14.4□□□□□ -0.1
RFT1Q96AA3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 TCAF2P1-201ENST00000291129 2421 ntBASIC14.4□□□□□ -0.1
RFT1Q96AA3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 KRT18P31-201ENST00000506277 1292 ntBASIC14.4□□□□□ -0.1
RFT1Q96AA3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 MTDHP4-201ENST00000600287 670 ntBASIC14.4□□□□□ -0.1
RFT1Q96AA3 AC013467.2-201ENST00000605472 835 ntBASIC14.4□□□□□ -0.1
RFT1Q96AA3 AL589182.2-201ENST00000619332 1049 ntBASIC14.4□□□□□ -0.1
RFT1Q96AA3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.4□□□□□ -0.1
RFT1Q96AA3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFT1Q96AA3 MYO15B-237ENST00000642007 4893 ntBASIC14.4□□□□□ -0.11
RFT1Q96AA3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 TOP3BP1-201ENST00000420768 1380 ntBASIC14.39□□□□□ -0.11
RFT1Q96AA3 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.39□□□□□ -0.11
RFT1Q96AA3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 PI4KAP1-204ENST00000612579 1703 ntBASIC14.39□□□□□ -0.11
RFT1Q96AA3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 AC139887.3-201ENST00000568585 713 ntBASIC14.39□□□□□ -0.11
RFT1Q96AA3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms