Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.19■□□□□ 0.34
DDX1Q92499 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DDX1Q92499 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.19■□□□□ 0.34
DDX1Q92499 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.19■□□□□ 0.34
DDX1Q92499 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.19■□□□□ 0.34
DDX1Q92499 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.19■□□□□ 0.34
DDX1Q92499 AC024267.1-201ENST00000582320 895 ntBASIC17.19■□□□□ 0.34
DDX1Q92499 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.19■□□□□ 0.34
DDX1Q92499 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.19■□□□□ 0.34
DDX1Q92499 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.19■□□□□ 0.34
DDX1Q92499 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DDX1Q92499 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.19■□□□□ 0.34
DDX1Q92499 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
DDX1Q92499 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.19■□□□□ 0.34
DDX1Q92499 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.19■□□□□ 0.34
DDX1Q92499 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DDX1Q92499 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
DDX1Q92499 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
DDX1Q92499 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
DDX1Q92499 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
DDX1Q92499 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DDX1Q92499 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
DDX1Q92499 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.18■□□□□ 0.34
DDX1Q92499 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
DDX1Q92499 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.18■□□□□ 0.34
DDX1Q92499 AL592309.1-201ENST00000443127 649 ntBASIC17.18■□□□□ 0.34
DDX1Q92499 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
DDX1Q92499 SLC25A39P2-201ENST00000537614 270 ntBASIC17.18■□□□□ 0.34
DDX1Q92499 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.18■□□□□ 0.34
DDX1Q92499 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.18■□□□□ 0.34
DDX1Q92499 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.18■□□□□ 0.34
DDX1Q92499 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.18■□□□□ 0.34
DDX1Q92499 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
DDX1Q92499 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 AL691432.1-201ENST00000596308 1422 ntBASIC17.18■□□□□ 0.34
DDX1Q92499 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
DDX1Q92499 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DDX1Q92499 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.18■□□□□ 0.34
DDX1Q92499 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
DDX1Q92499 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.17■□□□□ 0.34
DDX1Q92499 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.17■□□□□ 0.34
DDX1Q92499 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
DDX1Q92499 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.17■□□□□ 0.34
DDX1Q92499 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.17■□□□□ 0.34
DDX1Q92499 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.17■□□□□ 0.34
DDX1Q92499 AC007274.1-201ENST00000439805 662 ntBASIC17.17■□□□□ 0.34
DDX1Q92499 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.17■□□□□ 0.34
DDX1Q92499 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
DDX1Q92499 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.17■□□□□ 0.34
DDX1Q92499 AC093520.2-201ENST00000561830 333 ntBASIC17.17■□□□□ 0.34
DDX1Q92499 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.17■□□□□ 0.34
DDX1Q92499 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.17■□□□□ 0.34
DDX1Q92499 AC027307.3-201ENST00000594262 1100 ntBASIC17.17■□□□□ 0.34
DDX1Q92499 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
DDX1Q92499 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
DDX1Q92499 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.17■□□□□ 0.34
DDX1Q92499 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
DDX1Q92499 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.17■□□□□ 0.34
DDX1Q92499 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms