Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 MIR943-201ENST00000401286 94 ntBASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
FNDC9Q8TBE3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 AC140878.1-201ENST00000565277 250 ntBASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 AC005498.2-205ENST00000593218 784 ntBASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.59□□□□□ -0.07
FNDC9Q8TBE3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
FNDC9Q8TBE3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
FNDC9Q8TBE3 ALOX12P2-203ENST00000570921 1945 ntBASIC14.58□□□□□ -0.07
FNDC9Q8TBE3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.58□□□□□ -0.07
FNDC9Q8TBE3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.58□□□□□ -0.07
FNDC9Q8TBE3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
FNDC9Q8TBE3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
FNDC9Q8TBE3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
FNDC9Q8TBE3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.58□□□□□ -0.07
FNDC9Q8TBE3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
FNDC9Q8TBE3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
FNDC9Q8TBE3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
FNDC9Q8TBE3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.58□□□□□ -0.08
FNDC9Q8TBE3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
FNDC9Q8TBE3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
FNDC9Q8TBE3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
FNDC9Q8TBE3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
FNDC9Q8TBE3 AL353705.2-201ENST00000428243 662 ntBASIC14.58□□□□□ -0.08
FNDC9Q8TBE3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms