Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TTC9CQ8N5M4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
TTC9CQ8N5M4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TTC9CQ8N5M4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.83□□□□□ -0.35
TTC9CQ8N5M4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
TTC9CQ8N5M4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
TTC9CQ8N5M4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 AC067930.6-201ENST00000623257 4947 ntBASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 MKNK2P1-201ENST00000437526 628 ntBASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 AC098859.1-201ENST00000502915 1238 ntBASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 AC008267.7-201ENST00000624570 1194 ntBASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TTC9CQ8N5M4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 AC024909.3-201ENST00000611513 2257 ntBASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 YBX2P1-201ENST00000394192 760 ntBASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 AL138918.1-201ENST00000568306 659 ntBASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 MIR4321-201ENST00000592276 80 ntBASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 AC026120.1-201ENST00000611536 926 ntBASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 SPTSSB-204ENST00000617024 1292 ntBASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms