Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 AL603756.1-201ENST00000606511 2163 ntBASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 FAM8A2P-201ENST00000528813 1142 ntBASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 U82695.1-201ENST00000635752 1889 ntBASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 AC018665.1-201ENST00000622927 1362 ntBASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 RN7SL399P-201ENST00000471648 279 ntBASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEFF1Q8IYR6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 USP32P1-208ENST00000506594 1164 ntBASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms