Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 AL512361.1-201ENST00000554200 418 ntBASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 AC009407.1-201ENST00000568958 598 ntBASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 AC008738.7-201ENST00000609744 511 ntBASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 FLJ16779-201ENST00000612722 7638 ntBASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.03■□□□□ 0.32
SCN4BQ8IWT1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 KRT8P12-202ENST00000472924 1397 ntBASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 AL662844.4-201ENST00000606367 2838 ntBASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCN4BQ8IWT1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SCN4BQ8IWT1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCN4BQ8IWT1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCN4BQ8IWT1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.02■□□□□ 0.31
SCN4BQ8IWT1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCN4BQ8IWT1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCN4BQ8IWT1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.02■□□□□ 0.31
SCN4BQ8IWT1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 AC092364.2-201ENST00000596710 2692 ntBASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 SPDYE17-201ENST00000412399 783 ntBASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 COX20P2-201ENST00000452636 358 ntBASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 AC009118.2-201ENST00000613275 655 ntBASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 AL033527.5-202ENST00000641632 1098 ntBASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 CYP4F24P-201ENST00000586049 1580 ntBASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms