Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 AL162726.2-201ENST00000438986 1017 ntBASIC17.43■□□□□ 0.38
HERC6Q8IVU3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 RNA5SP412-201ENST00000516234 123 ntBASIC17.43■□□□□ 0.38
HERC6Q8IVU3 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 KRT8P22-201ENST00000562317 1415 ntBASIC17.43■□□□□ 0.38
HERC6Q8IVU3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 PCDHB17P-201ENST00000539533 2393 ntBASIC17.43■□□□□ 0.38
HERC6Q8IVU3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HERC6Q8IVU3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 MIR5189-201ENST00000577370 114 ntBASIC17.42■□□□□ 0.38
HERC6Q8IVU3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 AL022328.1-201ENST00000610050 478 ntBASIC17.42■□□□□ 0.38
HERC6Q8IVU3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.42■□□□□ 0.38
HERC6Q8IVU3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 GPAA1P2-202ENST00000606848 1787 ntBASIC17.41■□□□□ 0.38
HERC6Q8IVU3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 AC022211.2-201ENST00000585075 2527 ntBASIC17.41■□□□□ 0.38
HERC6Q8IVU3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 ACTG1P3-201ENST00000431775 1114 ntBASIC17.41■□□□□ 0.38
HERC6Q8IVU3 CSF2RBP1-201ENST00000447905 391 ntBASIC17.41■□□□□ 0.38
HERC6Q8IVU3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.41■□□□□ 0.38
HERC6Q8IVU3 AC103810.3-201ENST00000583567 96 ntBASIC17.41■□□□□ 0.38
HERC6Q8IVU3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 AC244093.1-201ENST00000610837 814 ntBASIC17.41■□□□□ 0.38
HERC6Q8IVU3 CU634019.7-201ENST00000624153 1185 ntBASIC17.41■□□□□ 0.38
HERC6Q8IVU3 FP236241.2-201ENST00000624906 1185 ntBASIC17.41■□□□□ 0.38
HERC6Q8IVU3 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 AC092068.3-201ENST00000587894 2016 ntBASIC17.41■□□□□ 0.38
HERC6Q8IVU3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.41■□□□□ 0.38
HERC6Q8IVU3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms