Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.41■□□□□ 0.86
PTF1AQ7RTS3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC20.41■□□□□ 0.86
PTF1AQ7RTS3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTF1AQ7RTS3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.41■□□□□ 0.86
PTF1AQ7RTS3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC20.41■□□□□ 0.86
PTF1AQ7RTS3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
PTF1AQ7RTS3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
PTF1AQ7RTS3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC20.41■□□□□ 0.86
PTF1AQ7RTS3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PTF1AQ7RTS3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.41■□□□□ 0.86
PTF1AQ7RTS3 PCDHB18P-201ENST00000524813 2368 ntBASIC20.41■□□□□ 0.86
PTF1AQ7RTS3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTF1AQ7RTS3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.41■□□□□ 0.86
PTF1AQ7RTS3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 RPL17P11-201ENST00000417593 544 ntBASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 AP002490.2-201ENST00000524791 560 ntBASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 AC141586.5-201ENST00000624546 2050 ntBASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTF1AQ7RTS3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTF1AQ7RTS3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTF1AQ7RTS3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTF1AQ7RTS3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
PTF1AQ7RTS3 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 AL133499.1-201ENST00000596207 608 ntBASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 AC018635.2-201ENST00000608625 364 ntBASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 AC006453.4-201ENST00000636949 1252 ntBASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTF1AQ7RTS3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 HSPB1P2-201ENST00000448722 546 ntBASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 RN7SL720P-201ENST00000488178 304 ntBASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 AC044849.1-201ENST00000519737 1188 ntBASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 UBALD1-205ENST00000590891 2641 ntBASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTF1AQ7RTS3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC20.37■□□□□ 0.85
PTF1AQ7RTS3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.37■□□□□ 0.85
PTF1AQ7RTS3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
PTF1AQ7RTS3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.37■□□□□ 0.85
PTF1AQ7RTS3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTF1AQ7RTS3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms