Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.83□□□□□ -0.03
SMARCD3Q6STE5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.83□□□□□ -0.03
SMARCD3Q6STE5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMARCD3Q6STE5 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMARCD3Q6STE5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 PMS2P4-201ENST00000412466 1052 ntBASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 KRT18P67-201ENST00000432816 1264 ntBASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 CXCL1P1-201ENST00000502804 216 ntBASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 UNC93B7-201ENST00000509439 705 ntBASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 AL121912.1-201ENST00000603683 238 ntBASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 AL031055.1-201ENST00000606362 631 ntBASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.83□□□□□ -0.04
SMARCD3Q6STE5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 HMGA1P7-201ENST00000406908 502 ntBASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 PRSS29P-201ENST00000440800 595 ntBASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 AL645728.2-201ENST00000641974 660 ntBASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.82□□□□□ -0.04
SMARCD3Q6STE5 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 AC073347.1-201ENST00000421633 2643 ntBASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms