Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 AL589702.1-201ENST00000641229 1509 ntBASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.89■□□□□ 0.3
RFWD3Q6PCD5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.89■□□□□ 0.3
RFWD3Q6PCD5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.89■□□□□ 0.3
RFWD3Q6PCD5 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 AC144831.1-201ENST00000573312 2656 ntBASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 AC067863.1-201ENST00000494933 530 ntBASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 AC005498.2-205ENST00000593218 784 ntBASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 LINC01144-201ENST00000626198 1710 ntBASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFWD3Q6PCD5 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 TSPY26P-202ENST00000565928 3884 ntBASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 FAM220BP-201ENST00000377689 816 ntBASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 MIR770-201ENST00000390219 98 ntBASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 AL390955.2-201ENST00000603032 514 ntBASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFWD3Q6PCD5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms