Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 TUBBP5-203ENST00000508529 1334 ntBASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 AC024681.1-201ENST00000521917 487 ntBASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 NPM1P43-201ENST00000558669 786 ntBASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 AC005357.2-202ENST00000590507 1060 ntBASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 ECM1P1-201ENST00000604092 1279 ntBASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H2BCQ6DN03 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 RN7SL8P-201ENST00000461771 266 ntBASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 AP001065.2-201ENST00000617205 644 ntBASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
HIST2H2BCQ6DN03 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms