Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 AC068880.1-201ENST00000507289 2297 ntBASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 AC108725.1-201ENST00000495472 409 ntBASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 AC120045.2-201ENST00000567334 178 ntBASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 AC010328.2-201ENST00000597698 1111 ntBASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 AL049840.4-201ENST00000602422 811 ntBASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD4Q5XG99 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 BAATP1-201ENST00000412284 1225 ntBASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 TOMM22P5-201ENST00000416399 439 ntBASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 AC079316.1-201ENST00000548397 411 ntBASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD4Q5XG99 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 AC016694.1-201ENST00000434179 700 ntBASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 FTH1P14-201ENST00000482930 551 ntBASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms