Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 AC079328.1-201ENST00000560358 952 ntBASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 AP001282.1-201ENST00000531301 1499 ntBASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 AC093433.1-201ENST00000458048 571 ntBASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 ADM-202ENST00000524948 584 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 AC243562.2-201ENST00000561247 970 ntBASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 TMEM198B-204ENST00000484016 896 ntBASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 AC044849.1-201ENST00000519737 1188 ntBASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13DQ5THJ4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 C2orf27AP3-201ENST00000434123 579 ntBASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 AL354718.3-201ENST00000616414 581 ntBASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 CR382287.1-201ENST00000623954 586 ntBASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms