Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC6LQ2NKX8 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC6LQ2NKX8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.2■□□□□ 0.34
ERCC6LQ2NKX8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC6LQ2NKX8 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC6LQ2NKX8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC6LQ2NKX8 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC6LQ2NKX8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.2■□□□□ 0.34
ERCC6LQ2NKX8 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC6LQ2NKX8 AJ011931.1-201ENST00000618749 2492 ntBASIC17.2■□□□□ 0.34
ERCC6LQ2NKX8 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC6LQ2NKX8 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 GUSBP12-201ENST00000513727 720 ntBASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC6LQ2NKX8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 AC005622.1-201ENST00000636801 1703 ntBASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 AC010203.1-204ENST00000548782 407 ntBASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 AL031432.5-201ENST00000641059 760 ntBASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 LINC01230-201ENST00000625222 3017 ntBASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC6LQ2NKX8 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms