Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
UBE3AQ05086 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.05■□□□□ 0.32
UBE3AQ05086 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE3AQ05086 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE3AQ05086 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE3AQ05086 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE3AQ05086 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE3AQ05086 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.05■□□□□ 0.32
UBE3AQ05086 RPL13P2-201ENST00000440687 659 ntBASIC17.05■□□□□ 0.32
UBE3AQ05086 ENPP7P5-201ENST00000541031 1031 ntBASIC17.05■□□□□ 0.32
UBE3AQ05086 MIR5189-201ENST00000577370 114 ntBASIC17.05■□□□□ 0.32
UBE3AQ05086 LINC01115-203ENST00000606068 577 ntBASIC17.05■□□□□ 0.32
UBE3AQ05086 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE3AQ05086 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE3AQ05086 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.05■□□□□ 0.32
UBE3AQ05086 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBE3AQ05086 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.05■□□□□ 0.32
UBE3AQ05086 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE3AQ05086 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
UBE3AQ05086 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
UBE3AQ05086 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
UBE3AQ05086 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.04■□□□□ 0.32
UBE3AQ05086 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE3AQ05086 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE3AQ05086 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE3AQ05086 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE3AQ05086 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.04■□□□□ 0.32
UBE3AQ05086 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
UBE3AQ05086 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.04■□□□□ 0.32
UBE3AQ05086 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE3AQ05086 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
UBE3AQ05086 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE3AQ05086 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.04■□□□□ 0.32
UBE3AQ05086 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.04■□□□□ 0.32
UBE3AQ05086 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
UBE3AQ05086 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.04■□□□□ 0.32
UBE3AQ05086 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.04■□□□□ 0.32
UBE3AQ05086 AC245100.5-201ENST00000452108 331 ntBASIC17.04■□□□□ 0.32
UBE3AQ05086 CTBP2P5-201ENST00000454986 1264 ntBASIC17.04■□□□□ 0.32
UBE3AQ05086 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.04■□□□□ 0.32
UBE3AQ05086 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE3AQ05086 AL583810.1-201ENST00000553344 1045 ntBASIC17.04■□□□□ 0.32
UBE3AQ05086 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.04■□□□□ 0.32
UBE3AQ05086 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE3AQ05086 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.04■□□□□ 0.32
UBE3AQ05086 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE3AQ05086 PDIA3P1-201ENST00000471856 1510 ntBASIC17.04■□□□□ 0.32
UBE3AQ05086 AL133338.1-201ENST00000565695 1517 ntBASIC17.04■□□□□ 0.32
UBE3AQ05086 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE3AQ05086 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE3AQ05086 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE3AQ05086 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE3AQ05086 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.04■□□□□ 0.32
UBE3AQ05086 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE3AQ05086 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE3AQ05086 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
UBE3AQ05086 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
UBE3AQ05086 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
UBE3AQ05086 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.04■□□□□ 0.32
UBE3AQ05086 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE3AQ05086 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE3AQ05086 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE3AQ05086 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE3AQ05086 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE3AQ05086 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE3AQ05086 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE3AQ05086 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE3AQ05086 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
UBE3AQ05086 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.03■□□□□ 0.32
UBE3AQ05086 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UBE3AQ05086 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.03■□□□□ 0.32
UBE3AQ05086 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE3AQ05086 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.03■□□□□ 0.32
UBE3AQ05086 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE3AQ05086 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE3AQ05086 TUBB1P2-201ENST00000422712 1306 ntBASIC17.03■□□□□ 0.32
UBE3AQ05086 TUBB1P1-201ENST00000503144 1300 ntBASIC17.03■□□□□ 0.32
UBE3AQ05086 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE3AQ05086 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE3AQ05086 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE3AQ05086 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE3AQ05086 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.03■□□□□ 0.32
UBE3AQ05086 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.03■□□□□ 0.32
UBE3AQ05086 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
UBE3AQ05086 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.03■□□□□ 0.32
UBE3AQ05086 RNA5SP412-201ENST00000516234 123 ntBASIC17.03■□□□□ 0.32
UBE3AQ05086 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.03■□□□□ 0.32
UBE3AQ05086 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.03■□□□□ 0.32
UBE3AQ05086 AC243562.2-201ENST00000561247 970 ntBASIC17.03■□□□□ 0.32
UBE3AQ05086 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE3AQ05086 BRI3BPP1-201ENST00000594224 787 ntBASIC17.03■□□□□ 0.32
UBE3AQ05086 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.03■□□□□ 0.32
UBE3AQ05086 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE3AQ05086 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE3AQ05086 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
UBE3AQ05086 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE3AQ05086 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UBE3AQ05086 AL691432.1-201ENST00000596308 1422 ntBASIC17.03■□□□□ 0.32
UBE3AQ05086 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE3AQ05086 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms